RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 OR7G3Q8NG95 312 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 NT5C3BQ969T7 300 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 EBF2Q9HAK2 575 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 OAZ3Q9UMX2 235 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 AKAP11Q9UKA4 1901 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 DDX60LQ5H9U9 1706 aaKnown RBP9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 SH3PXD2BA1X283 911 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 EEDO75530 441 aaKnown RBP9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 SGSHP51688 502 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 ERVPABLB-1P60509 514 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 FOXK1P85037 733 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 TRNP1Q6NT89 227 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 P2RY8Q86VZ1 359 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 TEX26Q8N6G2 289 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 YIPF7Q8N8F6 280 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 PSMA8Q8TAA3 256 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 IL4I1Q96RQ9 567 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 PISDQ9UG56 409 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 MMP17Q9ULZ9 603 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 CLEC4AQ9UMR7 237 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 SESN1Q9Y6P5 492 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 IGLV3-10A0A075B6K4 115 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 GJE1A6NN92 205 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 TBX1O43435 398 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 TSC22D2O75157 780 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 ATXN1LP0C7T5 689 aaKnown RBP9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 AOAHP28039 575 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 CCR7P32248 378 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 RAB25P57735 213 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 MERTKQ12866 999 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 TMEM52BQ4KMG9 183 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 CRTC2Q53ET0 693 aaPredicted RBP9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 ALG1LQ6GMV1 187 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 RPL13AP3Q6NVV1 102 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 SATL1Q86VE3 508 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 SDR16C5Q8N3Y7 309 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 ZUFSPQ96AP4 578 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 CHCHD6Q9BRQ6 235 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 POLR2J2Q9GZM3 115 aaKnown RBP9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 GAREM1Q9H706 876 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 BRD7Q9NPI1 651 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 ABCB10Q9NRK6 738 aa9.88□□□□□ -0.83
NIPAL3-201ENST00000003912 AIREO43918 545 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 RHDQ02161 417 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 DCTN2Q13561 401 aaKnown RBP9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 FIP1L1Q6UN15 594 aaKnown RBP9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 SLCO6A1Q86UG4 719 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 FANK1Q8TC84 345 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 LINC01599Q8WXQ3 324 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 ACTRT3Q9BYD9 372 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 TAS2R7Q9NYW3 318 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 PAIP2BQ9ULR5 123 aaKnown RBP9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 DNAJC15Q9Y5T4 150 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 A0A0A6YYC8 382 aaPredicted RBP9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 I3L1I5 382 aaPredicted RBP9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 SSNA1O43805 119 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 C1orf105O95561 183 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 CERS1P27544 350 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 SH3BP2P78314 561 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 PLPP6Q8IY26 295 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 ZNF100Q8IYN0 542 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 LNX2Q8N448 690 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 PJA1Q8NG27 643 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 THEM6Q8WUY1 208 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 TCTN2Q96GX1 697 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 DOHHQ9BU89 302 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 SP140LQ9H930 580 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 DMRT3Q9NQL9 472 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 COMMD3-BMI1R4GMX3 469 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 GOLGA4Q13439 2230 aaKnown RBP9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 CDC40O60508 579 aaKnown RBP eCLIP9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 CHRM5P08912 532 aaPredicted RBP9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 ADRA1AP35348 466 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 DCDC1P59894 354 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 IL18Q14116 193 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 TYSND1Q2T9J0 566 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 ARL14Q8N4G2 192 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 ANKFN1Q8N957 763 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 MYADMQ96S97 322 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 TRNAU1APQ9NX07 287 aaKnown RBP9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 C2orf92A0A1B0GVN3 265 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 CIB4A0PJX0 185 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 LOC110117498-PIK3R3F6TDL0 507 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 SNPHO15079 494 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 SRPX2O60687 465 aaPredicted RBP9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 RDH16O75452 317 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 MMP12P39900 470 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 DCAF12Q5T6F0 453 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 RSPO2Q6UXX9 243 aaPredicted RBP9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 OR13J1Q8NGT2 312 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 NEIL2Q969S2 332 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 ZNF304Q9HCX3 659 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 PRSS21Q9Y6M0 314 aa9.87□□□□□ -0.83
NIPAL3-201ENST00000003912 C17orf105B2RV13 164 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 EDNRAP25101 427 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 CDH11P55287 796 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 AP3S2P59780 193 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 DMPKQ09013 629 aa9.86□□□□□ -0.83
NIPAL3-201ENST00000003912 FAM189A2Q15884 450 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms