RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Bhlhe41Q99PV5 410 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Trmt11Q9CWH5 460 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Chmp2aQ9DB34 222 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Tbx20Q9ES03 445 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 PpieQ9QZH3 301 aaKnown RBP9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Pfdn5Q9WU28 154 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 VapaQ9WV55 249 aaKnown RBP9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Mtmr1Q9Z2C4 669 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 4933424G06RikA0A140LIP3 267 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Tmem236A2ARJ3 344 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Kcnk1O08581 336 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 P01641 117 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 P01673 111 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Limk1P53668 647 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Slc12a3P59158 1002 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Cited1P97769 203 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Ttyh2Q3TH73 532 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Usp39Q3TIX9 564 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Crtc2Q3U182 692 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Slc39a12Q5FWH7 689 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Olfr1364Q5SZS9 314 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Slc23a3Q60850 611 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Gpr19Q61121 415 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 LdhdQ7TNG8 484 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Dsg1bQ7TSF1 1060 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Nudt15Q8BG93 170 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 PigmQ8C2R7 423 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Yipf4Q8C407 246 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Henmt1Q8CAE2 395 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Rdh13Q8CEE7 334 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Fam149aQ8CFV2 787 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Bloc1s5Q8R015 185 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Acaa1bQ8VCH0 424 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Olfr1254Q8VFB1 314 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Olfr1217Q8VGG1 304 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Fam118aQ91YN1 357 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Diras1Q91Z61 198 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Rab4bQ91ZR1 213 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Prmt7Q922X9 692 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Slco6d1Q9D5W6 683 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Dennd6bQ9D9V7 585 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Adat1Q9JHI2 499 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Nr4a3Q9QZB6 627 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Epm2aQ9WUA5 330 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Cited4Q9WUL8 182 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Oas1eA0A0J9YV76 386 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Zfp472B0V2W5 534 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Gm12789B1AUV7 164 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Olfr520E9Q518 316 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 H2-M11F6U8V3 335 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Vmn2r4K7N784 913 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Vmn2r53L7N473 806 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Efna3O08545 230 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Npc1O35604 1277 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Kcnj15O88932 375 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Ptpn6P29351 595 aaKnown RBP9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 UbqlnlQ14DL0 610 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Diras2Q5PR73 199 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 4930438A08RikQ5SPH3 536 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 LpoQ5SW46 710 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Ccdc85bQ6PDY0 202 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Prrt3Q6PE13 971 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Slc7a6Q8BGK6 515 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Neto2Q8BNJ6 525 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Sik2Q8CFH6 931 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Ttc23Q8CHY7 488 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Esrp2Q8K0G8 717 aaKnown RBP9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Mmp21Q8K3F2 568 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Olfr461Q8VF30 313 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Olfr790Q8VGJ3 322 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Olfr1414Q8VGU5 312 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Kif12Q9D2Z8 642 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Ca7Q9ERQ8 264 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 EefsecQ9JHW4 583 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Cnot9Q9JKY0 299 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Dmrt1Q9QZ59 374 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Npas3Q9QZQ0 925 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 B3GNT2Q9Z222 397 aa9.32□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Ldlrad3A2AR95 345 aa9.31□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Ttll2A4Q9E4 540 aa9.31□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Gm436B1AVU6 407 aa9.31□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Mettl11bB2RXM4 283 aa9.31□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Dpysl2O08553 572 aaKnown RBP9.31□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Aldh1a7O35945 501 aa9.31□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 GcatO88986 416 aa9.31□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Fgfr2P21803 821 aa9.31□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Slc6a11P31650 627 aa9.31□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Agtr2P35374 363 aa9.31□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Yap1P46938 488 aa9.31□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Cnr1P47746 473 aa9.31□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Ccr1P51675 355 aa9.31□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Cdo1P60334 200 aa9.31□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 SnrpeP62305 92 aaKnown RBP9.31□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Kcnj3P63250 501 aa9.31□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 VldlrP98156 873 aa9.31□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 1700061G19RikQ08EE8 705 aa9.31□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 GiprQ0P543 460 aa9.31□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Taar7eQ5QD09 358 aa9.31□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Taar7bQ5QD11 358 aa9.31□□□□□ -0.92
Hmgb1-201ENSMUST00000085546 Brinp2Q6DFY8 783 aa9.31□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 51.9 ms