RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Ssu72Q9CY97 194 aaKnown RBP11.36□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Agpat5Q9D1E8 365 aa11.36□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Q9DAE7 121 aa11.36□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Prl8a8Q9DAS4 241 aa11.36□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Ndufs3Q9DCT2 263 aaKnown RBP11.36□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Maged2Q9ER67 616 aa11.36□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Tcea2Q9QVN7 299 aa11.36□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Plek2Q9WV52 353 aa11.36□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Asxl3Q8C4A5 2259 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Fam131cA2ADB2 273 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Gm3752A6NAT4 150 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Gm8159E9Q0R1 267 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Adamts3E9Q287 1204 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Gm10340K7N708 205 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 RfngO09009 332 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Atn1O35126 1175 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Cx3cl1O35188 395 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Dok2O70469 412 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 NgfP01139 241 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 P04213 122 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Alas2P08680 587 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Htr3aP23979 487 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Rps13P62301 151 aaKnown RBP11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Elavl1P70372 326 aaKnown RBP11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Tex11Q14AT2 947 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Defb41Q30KP6 65 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Myo1dQ5SYD0 1006 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Lefty1Q64280 368 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Klhdc10Q6PAR0 439 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Tex13c3Q810P0 219 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Mrps35Q8BJZ4 320 aaKnown RBP11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Cldn17Q8BXA6 224 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 AopepQ8BXQ6 817 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Ston2Q8BZ60 895 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Ska3Q8C263 411 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Zfp446Q8C9M8 523 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Gpr1Q8K087 353 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Serinc2Q8K0E7 450 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Vmn1r22Q8R2D1 302 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Q8R3Y5 413 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Efcab7Q8VDY4 628 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Olfr649Q8VGW1 312 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Cstf3Q99LI7 717 aaKnown RBP11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Tada1Q99LM9 335 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Ddx47Q9CWX9 455 aaKnown RBP11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Exo5Q9CXP9 373 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Maf1Q9D0U6 258 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Tex29Q9DA77 186 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Tceal6Q9DB24 200 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Dhx34Q9DBV3 1145 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Brix1Q9DCA5 353 aaKnown RBP11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Tdp2Q9JJX7 370 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Slc30a7Q9JKN1 378 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Spo11Q9WTK8 396 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Serpinb6cW4VSP4 379 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Epg5Q80TA9 2572 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Pkd1l3Q2EG98 2201 aa11.35□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Gm19410A0A140LJC7 2098 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Kiaa1324A2AFS3 1009 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Gm13088A2AGW6 460 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Vmn2r56E9Q4U5 779 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Zfp934K7N6H3 473 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 FhitO89106 150 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Gap43P06837 227 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Gabra3P26049 492 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 VdrP48281 422 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Hnrnph2P70333 449 aaKnown RBP11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Bop1P97452 732 aaKnown RBP11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Dlk1Q09163 385 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Olfr381Q5SSP0 311 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 PhgdhQ61753 533 aaKnown RBP11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Abcg1Q64343 666 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Olfr835Q7TRG7 311 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 RragdQ7TT45 449 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Atg4bQ8BGE6 393 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Enpp6Q8BGN3 440 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Ccdc68Q8BVC4 333 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Ugt2a3Q8BWQ1 534 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Tmem150cQ8C8S3 249 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Sulf2Q8CFG0 875 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Akr1c20Q8VC77 323 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Hyal3Q8VEI3 412 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Olfr1278Q8VF39 313 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Olfr689Q8VG18 320 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Cd209aQ91ZX1 238 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 EedQ921E6 441 aaKnown RBP11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 EtfdhQ921G7 616 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Ash1lQ99MY8 2958 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Pno1Q9CPS7 248 aaKnown RBP11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Dtwd1Q9D8U7 304 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Ing2Q9ESK4 281 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 FetubQ9QXC1 388 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Cdh13Q9WTR5 714 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Mpp2Q9WV34 552 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Efemp2Q9WVJ9 443 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 AgtrapQ9WVK0 161 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Heatr5bQ8C547 2070 aa11.34□□□□□ -0.59
Ccdc28a-202ENSMUST00000080860 Olfr1480A0A140LIR8 359 aa11.33□□□□□ -0.6
Ccdc28a-202ENSMUST00000080860 Olfr1253A2AUA2 318 aa11.33□□□□□ -0.6
Ccdc28a-202ENSMUST00000080860 Itih4A6X935 942 aa11.33□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 40.4 ms