RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 P01672 111 aa6.57□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Klk1b9P15949 261 aa6.57□□□□□ -1.36
Bdnf-201ENSMUST00000053317 RxrgP28705 463 aa6.57□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Syt4P40749 425 aa6.57□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Aldh3a2P47740 484 aa6.57□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Rps15P62843 145 aaKnown RBP6.57□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Ak8Q32M07 479 aa6.57□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Q5SPV6 233 aa6.57□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Trim24Q64127 1051 aaKnown RBP6.57□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Rbl1Q64701 1063 aa6.57□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Olfr1313Q7TQW8 311 aa6.57□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Olfr293Q7TS10 336 aa6.57□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gadl1Q80WP8 550 aa6.57□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Panx3Q8CEG0 392 aa6.57□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Tmem259Q8CIV2 574 aa6.57□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Prkd3Q8K1Y2 889 aa6.57□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Fig4Q91WF7 907 aa6.57□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Fastkd2Q922E6 689 aaKnown RBP6.57□□□□□ -1.36
Bdnf-201ENSMUST00000053317 AadacQ99PG0 398 aa6.57□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Itgb3bpQ9CQ82 176 aa6.57□□□□□ -1.36
Bdnf-201ENSMUST00000053317 NwcQ9CQI4 244 aa6.57□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Stpg4Q9DAG5 247 aa6.57□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Slc13a2Q9ES88 586 aa6.57□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gm3285A0A1W2P7U0 201 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Pkd2l1A2A259 760 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Ceacam3E9Q6J4 706 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 4930451I11RikE9Q9R3 111 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Spdye4cI6XKQ3 339 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Prl4a1O35256 227 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Ech1O35459 327 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Dhcr7O88455 471 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gria1P23818 907 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Rab12P35283 243 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Kcnj13P86046 360 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Zfp935Q14DI0 353 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Coq10bQ3THF9 240 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Dlx3Q64205 287 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gpr141Q7TQP0 305 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Tgm6Q8BM11 706 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Peli3Q8BXR6 445 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Tm6sf2Q8R1J1 378 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Olfr449Q8VGW8 311 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Ubap2Q91VX2 1132 aaKnown RBP6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Mrps18aQ99N85 196 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Pno1Q9CPS7 248 aaKnown RBP6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Riok2Q9CQS5 547 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Prelid3bQ9CYY7 195 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Arl13aQ9D416 372 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Hes6Q9JHE6 224 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Cabin1G3X8Q1 2187 aaKnown RBP6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Pcsk5Q04592 1877 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gm28897A0A087WP44 222 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gm9920D3YVZ2 140 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 MutP16332 748 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Cma1P21844 247 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Cdh4P39038 913 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 TfamP40630 243 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Cyp2a12P56593 492 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Cd59bP58019 129 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Ythdf1P59326 559 aaKnown RBP6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Ica1P97411 478 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 HexdcQ3U4H6 486 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Macrod2Q3UYG8 475 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Paqr6Q6TCG5 343 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Lrrc25Q8K1T1 297 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Clrn1Q8K445 232 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Bloc1s5Q8R015 185 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Vmn1r217Q8R270 298 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Vmn1r33Q8R2E0 305 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Exd2Q8VEG4 650 aaKnown RBP6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 DdoQ922Z0 341 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Zfp810Q99K45 461 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Vkorc1Q9CRC0 161 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Q9CXL3 195 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 NarfQ9CYQ7 462 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Efhd2Q9D8Y0 240 aaKnown RBP6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 MyotQ9JIF9 496 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Eif2s3xQ9Z0N1 472 aaKnown RBP6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Cldn14Q9Z0S3 239 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Igkv6-20A0A140T8P2 115 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Arhgap36B1AUC7 590 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gm5849J3QPE5 117 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Avpr2O88721 371 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 ChgbP16014 677 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Ces1cP23953 554 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Trpv5P69744 723 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Pip5k1bP70181 539 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Hp1bp3Q3TEA8 554 aaKnown RBP6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Trafd1Q3UDK1 580 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Taar7dQ5QD10 358 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Samd4bQ80XS6 687 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Anapc2Q8BZQ7 837 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 SynpoQ8CC35 929 aaKnown RBP6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Hist1h2aaQ8CGP4 129 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Adam4Q8CGQ2 763 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Pcdhb16Q91Y03 802 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Rad51cQ924H5 366 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Trmt5Q9D0C4 501 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Arpc5lQ9D898 153 aa6.56□□□□□ -1.36
Bdnf-201ENSMUST00000053317 Gtf2e2Q9D902 292 aa6.56□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 43.4 ms