RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Atp6v1hQ8BVE3 483 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Pithd1Q8BWR2 211 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Cldn17Q8BXA6 224 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Il17rdQ8JZL1 738 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Bdh2Q8JZV9 245 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Ppp1r8Q8R3G1 351 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 AcmsdQ8R519 336 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Rnf130Q8VEM1 419 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Olfr103Q920Y8 313 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Gpr146Q99LE2 333 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Ncbp2Q9CQ49 156 aaKnown RBP8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Tmem35aQ9D328 167 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 RgccQ9DBX1 137 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Paqr5Q9DCU0 330 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Dclre1aQ9JIC3 1026 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Smpd3Q9JJY3 655 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 DguokQ9QX60 277 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Aqp5Q9WTY4 265 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Lbx2Q9WUN8 195 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Dpp6Q9Z218 804 aa8.25□□□□□ -1.09
Trim39-201ENSMUST00000042717 Sirpb1aA0A0A6YYP6 397 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Gm21083A0A0G2JFD5 256 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Gm21149A0A0G2JFY7 255 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 EXOC1LB9EK06 172 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Hs3st4D3YVV6 449 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Speer4cG3UXD1 256 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Gm17019K7N6W5 255 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Rps6ka3P18654 740 aaKnown RBP8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Dlk1Q09163 385 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Q3U6N9 222 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Clca4bQ3UW98 925 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Chsy3Q5DTK1 884 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 MuskQ61006 868 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Itih2Q61703 946 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Actr3bQ641P0 418 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Serpina3aQ6P4P1 422 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Snx6Q6P8X1 406 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Olfr1307Q7TQX1 312 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Olfr857Q7TRF7 309 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Kirrel2Q7TSU7 700 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Abhd16bQ80YU0 474 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Efr3aQ8BG67 819 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Rbms3Q8BWL5 431 aaKnown RBP8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Slc24a5Q8C261 501 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Tbl3Q8C4J7 801 aaKnown RBP8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Slc45a3Q8K0H7 553 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Tmem45bQ8VCZ2 278 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Pcdhb16Q91Y03 802 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Hint3Q9CPS6 165 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Cby3Q9CVN6 235 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Lrrc69Q9D9Q0 347 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Dennd6bQ9D9V7 585 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Igkv4-86A0A0G2JGE7 114 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Gm13420A0A140LJJ2 248 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Gm3373A6NAS7 205 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Kbtbd2G3X9X1 623 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Fmo6J3QMN6 532 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Vmn2r92L7N2A4 860 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Vmn2r52L7N2B2 852 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 FhitO89106 150 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Gnao1P18872 354 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Rpl3P27659 403 aaKnown RBP8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Etv4P28322 485 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Tead1P30051 426 aaKnown RBP8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 FaslgP41047 279 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Faf1P54731 649 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 OxtrP97926 388 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Acss3Q14DH7 682 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Gm1123Q1RME4 390 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Pcgf5Q3UK78 256 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Tubal3Q3UX10 446 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Defb28Q3V2L0 89 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Drd1Q61616 446 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 GgnQ80WJ1 673 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 ExogQ8C163 368 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Snx11Q91WL6 271 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Sh3bp4Q921I6 962 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Zdhhc6Q9CPV7 413 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Med27Q9DB40 311 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Dnaja2Q9QYJ0 412 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Nrf1Q9WU00 503 aa8.24□□□□□ -1.09
Trim39-201ENSMUST00000042717 Ccdc62E9PVD1 701 aa8.23□□□□□ -1.09
Trim39-201ENSMUST00000042717 Gm609E9Q573 300 aa8.23□□□□□ -1.09
Trim39-201ENSMUST00000042717 Gm10260F6YVP7 152 aa8.23□□□□□ -1.09
Trim39-201ENSMUST00000042717 Vmn1r170K7N6W9 304 aa8.23□□□□□ -1.09
Trim39-201ENSMUST00000042717 Olfr237-ps1K9J725 310 aa8.23□□□□□ -1.09
Trim39-201ENSMUST00000042717 Rgs7O54829 469 aa8.23□□□□□ -1.09
Trim39-201ENSMUST00000042717 Bcl2a1dO55179 172 aa8.23□□□□□ -1.09
Trim39-201ENSMUST00000042717 H2-AaP01910 256 aa8.23□□□□□ -1.09
Trim39-201ENSMUST00000042717 Arhgap39P59281 1107 aa8.23□□□□□ -1.09
Trim39-201ENSMUST00000042717 Slc9a3r1P70441 355 aa8.23□□□□□ -1.09
Trim39-201ENSMUST00000042717 FhP97807 507 aa8.23□□□□□ -1.09
Trim39-201ENSMUST00000042717 Klrb1Q0ZUP1 214 aa8.23□□□□□ -1.09
Trim39-201ENSMUST00000042717 Lin28bQ45KJ6 247 aaKnown RBP8.23□□□□□ -1.09
Trim39-201ENSMUST00000042717 Glt8d2Q640P4 349 aa8.23□□□□□ -1.09
Trim39-201ENSMUST00000042717 Cfap206Q6PE87 622 aa8.23□□□□□ -1.09
Trim39-201ENSMUST00000042717 Zpbp2Q6X786 326 aa8.23□□□□□ -1.09
Trim39-201ENSMUST00000042717 Chst14Q80V53 376 aa8.23□□□□□ -1.09
Trim39-201ENSMUST00000042717 Pqlc1Q80XM9 271 aa8.23□□□□□ -1.09
Trim39-201ENSMUST00000042717 Slc39a9Q8BFU1 308 aa8.23□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 25.2 ms