RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Ffar2Q8VCK6 330 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Tmem150aQ91WN2 271 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Lrch4Q921G6 680 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Ddx28Q9CWT6 540 aaKnown RBP14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Oaz3Q9R109 243 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Gm17190V9GX38 357 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Gm436B1AVU6 407 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Tex28B1AYN9 409 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Zfp40B1B1D3 796 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 H60cB1B213 197 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 BC035947B2RQY6 695 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Glyatl3E9Q5L8 290 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Sap18O55128 153 aaKnown RBP14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Slc6a12P31651 614 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Lman2lP59481 347 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Ntsr2P70310 416 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Gdf9Q07105 441 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Fam105aQ3TVP5 353 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Q3U7U4 132 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Eef2kmtQ3UZW7 335 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Nutm2Q3V0C3 733 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Ostf1Q62422 215 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Rapgefl1Q68EF8 662 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Q810M1 233 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Cmtr2Q8BWQ4 767 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Znf322Q8BZ89 410 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Gpr26Q8BZA7 337 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Atat1Q8K341 421 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Cbx7Q8VDS3 158 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Gpr146Q99LE2 333 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 TympQ99N42 471 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Plekhj1Q9D240 164 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 RtcAQ9D7H3 366 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 Dgat1Q9Z2A7 498 aa14.31□□□□□ -0.12
Nup54-201ENSMUST00000038514 BC034090A0A087WP46 1202 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Gm28576A0A087WRP6 222 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Gm14744B1AVU4 173 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Fam46aD3Z5S8 447 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Vmn2r9K7N6Z8 848 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Ceacam1P31809 521 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Nudt1P53368 156 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 SnrpgP62309 76 aaKnown RBP14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Pgap2Q3TQR0 254 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Upf3aQ3ULJ3 422 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Krt76Q3UV17 594 aaKnown RBP14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Hs3st2Q673U1 367 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Thoc7Q7TMY4 204 aaKnown RBP14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Olfr594Q7TRR4 311 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Ppp1r15bQ8BFW3 697 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Znf628Q8CJ78 1038 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 PpcsQ8VDG5 311 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Map3k21Q8VDG6 1002 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Olfr77Q8VEY9 312 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Ceacam2Q925P2 520 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Use1Q9CQ56 270 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Cxxc1Q9CWW7 660 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 5430402E10RikQ9D3N5 173 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 SrpraQ9DBG7 636 aaKnown RBP14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Mkrn2Q9ERV1 416 aaKnown RBP14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Lpar2Q9JL06 348 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Nfkb2Q9WTK5 899 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Trav1A0A075B5Z4 110 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Vmn2r115E9Q0E7 857 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Catsperg1E9Q355 1151 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Slc6a2O55192 617 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Polr1cP52432 346 aaKnown RBP14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Sox4Q06831 440 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 B4galnt2Q09199 510 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Ugt2b36Q3UEP4 530 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Ccdc177Q3UHB8 706 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Ccdc185Q3V118 621 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Cramp1Q6PG95 1285 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Olfr744Q7TRM0 323 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Acp6Q8BP40 418 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Mospd2Q9CWP6 518 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Mrpl19Q9D338 292 aaKnown RBP14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Atp5dQ9D3D9 168 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Ankrd7Q9D504 279 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Jph1Q9ET80 660 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Tlr4Q9QUK6 835 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Olfr1508Q9R0K4 310 aa14.3□□□□□ -0.12
Nup54-201ENSMUST00000038514 Ep400Q8CHI8 3072 aaKnown RBP14.29□□□□□ -0.12
Nup54-201ENSMUST00000038514 Scn5aQ9JJV9 2019 aa14.29□□□□□ -0.12
Nup54-201ENSMUST00000038514 Olfr1032A2ATE5 310 aa14.29□□□□□ -0.12
Nup54-201ENSMUST00000038514 Kif28pD3YXS5 1028 aa14.29□□□□□ -0.12
Nup54-201ENSMUST00000038514 Vmn2r106E9PY92 862 aa14.29□□□□□ -0.12
Nup54-201ENSMUST00000038514 Olfr171G5E8J1 314 aa14.29□□□□□ -0.12
Nup54-201ENSMUST00000038514 1700122O11RikJ3QPW6 241 aa14.29□□□□□ -0.12
Nup54-201ENSMUST00000038514 Vmn1r16K7N775 303 aa14.29□□□□□ -0.12
Nup54-201ENSMUST00000038514 OsmrO70458 971 aa14.29□□□□□ -0.12
Nup54-201ENSMUST00000038514 AcadmP45952 421 aaKnown RBP14.29□□□□□ -0.12
Nup54-201ENSMUST00000038514 OcmP51879 109 aa14.29□□□□□ -0.12
Nup54-201ENSMUST00000038514 Tbpl1P62340 186 aa14.29□□□□□ -0.12
Nup54-201ENSMUST00000038514 Cab39Q06138 341 aa14.29□□□□□ -0.12
Nup54-201ENSMUST00000038514 Trim46Q7TNM2 759 aa14.29□□□□□ -0.12
Nup54-201ENSMUST00000038514 PigzQ8BTP0 560 aa14.29□□□□□ -0.12
Nup54-201ENSMUST00000038514 IlvblQ8BU33 632 aa14.29□□□□□ -0.12
Nup54-201ENSMUST00000038514 E330021D16RikQ8BW45 371 aa14.29□□□□□ -0.12
Nup54-201ENSMUST00000038514 Gprin3Q8BWS5 763 aa14.29□□□□□ -0.12
Nup54-201ENSMUST00000038514 SprnQ8BWU1 147 aa14.29□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 9.8 ms