RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 TceancQ3US16 359 aa9.88□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Pum1Q80U78 1189 aaKnown RBP9.88□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Supv3l1Q80YD1 779 aaKnown RBP9.88□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 9130023H24RikQ8BG98 337 aa9.88□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Fjx1Q8BQB4 450 aa9.88□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Fam180aQ8BR21 173 aa9.88□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Fmo9Q8C116 539 aa9.88□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 PiguQ8K358 434 aa9.88□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Cables2Q8K3M5 476 aa9.88□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Olfr1391Q8VFA4 311 aa9.88□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Capn8Q91VA3 703 aa9.88□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Cldnd1Q9CQX5 253 aa9.88□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Nkiras2Q9CR56 191 aa9.88□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Moxd1Q9CXI3 613 aa9.88□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Dusp12Q9D0T2 339 aa9.88□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Med8Q9D7W5 268 aa9.88□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Wfdc1Q9ESH5 211 aa9.88□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 ClpxQ9JHS4 634 aaKnown RBP9.88□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Myg1Q9JK81 380 aa9.88□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Mbtps1Q9WTZ2 1052 aa9.88□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 A0A286YD17 136 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm11397F6V5V4 377 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm5798F7BTS7 198 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Itgb7P26011 806 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Rps15aP62245 130 aaKnown RBP9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Slc30a3P97441 388 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 CdonQ32MD9 1250 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Alg6Q3TAE8 507 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 DtlQ3TLR7 729 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 ClpbQ60649 677 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Serpinf2Q61247 491 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 PianpQ6P1B3 278 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Tha1Q6XPS7 400 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Pum2Q80U58 1066 aaKnown RBP9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Abhd13Q80UX8 337 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Pgm2l1Q8CAA7 621 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Olfr380Q8VGT3 311 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Ugt2b38Q91WH2 530 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Rpl4Q9D8E6 419 aaKnown RBP9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Trim2Q9ESN6 744 aaKnown RBP9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Tcea2Q9QVN7 299 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Dnajb8Q9QYI7 227 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Adamtsl1Q8BLI0 1745 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm5938A2AEN9 163 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm4969D3YZT1 566 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm8127E9Q0P0 100 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm8094K7N6U8 211 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Rdh5O55240 318 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Cldn2O88552 230 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Cyp4a10O88833 509 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Tk1P04184 233 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Lefty2P57785 368 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gabrb3P63080 473 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm7030Q0WXH6 285 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Xrra1Q3U3V8 786 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Tvp23aQ6NVH0 222 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Slc6a7Q6PGE7 637 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Tas2r117Q7M715 330 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 ItpkcQ7TS72 678 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Kcng4Q80XM3 506 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 PpcsQ8VDG5 311 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Senp8Q9D2Z4 221 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Vmn1r184E9Q2N4 314 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Aldh3b3J3QMK6 479 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Hsd3b6O35469 373 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Syn1O88935 706 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Ptpn2Q06180 406 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Prss55Q14BX2 321 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Runx3Q64131 409 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Paqr9Q6TCG2 375 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Ppp2r2bQ6ZWR4 443 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Olfr1318Q7TQW6 320 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Sgpp2Q810K3 354 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Unc5dQ8K1S2 956 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Prkd3Q8K1Y2 889 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Grhl2Q8K5C0 625 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Olfr1317Q8VF84 316 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Olfr315Q8VFG7 309 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Acot7Q91V12 381 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Marc2Q922Q1 338 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Cstf1Q99LC2 431 aaKnown RBP9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Rassf1Q99MK9 340 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Txndc17Q9CQM5 123 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 3300002I08RikQ9CXH3 147 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Cmtm8Q9CZR4 173 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Khdrbs2Q9WU01 349 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Olfr1366A0A1W2P740 328 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm7929A0A286YDV3 213 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm20431E9PY39 371 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm21977F6U3N7 213 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm8247F6VRJ8 213 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm8005F6YKY3 213 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm3015F6ZAP6 213 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm8212F6ZMY5 213 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm6465F7A7Y6 181 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm7954F7BAX1 213 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm8138F7BY56 213 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm8232F7CFJ3 213 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm17079F7D8Y4 213 aa9.87□□□□□ -0.83
Ccdc40-201ENSMUST00000035935 Gm8165L7N218 213 aa9.87□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms