RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Med22Q62276 200 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Ostf1Q62422 215 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Nipal3Q8BGN5 410 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Zhx3Q8C0Q2 951 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Piwil4Q8CGT6 848 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Armcx6Q8K3A6 301 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Tmem106aQ8VC04 261 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Chchd6Q91VN4 273 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Tmem179bQ9CY24 219 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 FopnlQ9CZS3 174 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Snx20Q9D2Y5 313 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 AgtrapQ9WVK0 161 aa17.88■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Cd163l1A0A1B0GSB0 991 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Spats1A2RRY8 269 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Zfp808B8JJZ4 753 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Tcf3P15806 651 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Nsg2P47759 171 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Il12rb2P97378 874 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Runx3Q64131 409 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 WdcpQ6NV72 663 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 CebpeQ6PZD9 281 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 AardQ811W1 167 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Glt28d2Q8BML3 165 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Txnl4bQ8BUH1 149 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Snx16Q8C080 344 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Samd14Q8K070 417 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Asb2Q8K0L0 634 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Olfr808Q8VGI8 312 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Vsx1Q91V10 363 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Snx11Q91WL6 271 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Abtb1Q99LJ2 478 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Sec23bQ9D662 767 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Pdzk1Q9JIL4 519 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Olfr316A0A0N4SVP2 306 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Rpl7a-ps3A0A140T8L1 270 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Gm5938A2AEN9 163 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Gm8765B7ZWJ3 1017 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 MycP01108 439 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Alox5P48999 674 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Gm906Q3V0M1 1017 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Slc26a10Q5EBI0 492 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Olfr318Q5NCD7 306 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Laptm4aQ60961 233 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Hist2h2aa1Q6GSS7 130 aaKnown RBP17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Trim46Q7TNM2 759 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Pqlc3Q8C6U2 202 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Polr1eQ8K202 482 aaKnown RBP17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Fmo2Q8K2I3 535 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Colec12Q8K4Q8 742 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Olfr382Q8VF79 312 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Olfr315Q8VFG7 309 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Olfr791Q8VGJ0 312 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Q91V76 315 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Atp5oQ9DB20 213 aaKnown RBP17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 PolmQ9JIW4 496 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 ItgaxQ9QXH4 1169 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Fem1aaQ9Z2G1 654 aa17.87■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 1700028J19RikA0A0U1RP08 172 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Gm5571P01639 130 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Gas2P11862 314 aaKnown RBP17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Cfl2P45591 166 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Anxa4P97429 319 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Kbtbd8Q3UQV5 599 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Taar7aQ5QD12 358 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Bod1Q5SQY2 173 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Gm2aQ60648 193 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Ppp3r2Q63811 179 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Sf1Q64213 653 aaKnown RBP17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 BC080695Q66JY9 481 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Prr14Q7TPN9 612 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Oog2Q7TPX8 476 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Carnmt1Q80UY1 400 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Zik1Q80YP6 463 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Znf750Q8BH05 703 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Neu4Q8BZL1 478 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 FevQ8QZW2 237 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Olfr818Q8VG46 318 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Fis1Q9CQ92 152 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Arpc3Q9JM76 178 aaKnown RBP17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Tbc1d25A1A5B6 742 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 RerglB2RVE2 204 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Olfr549E9Q542 316 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Zfp607bG3X9H3 648 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Mapk12O08911 367 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Slc6a2O55192 617 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Mtnd1P03888 318 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Pcsk2P21661 637 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Pou3f3P31361 497 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 ThpoP40226 356 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Atxn1P54254 791 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Ephb3P54754 993 aaKnown RBP17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Tmem38aQ3TMP8 298 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 GcgrQ61606 485 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Kiss1Q6Y4S4 130 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Itih5Q8BJD1 952 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Q8CF31 99 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Mapre2Q8R001 326 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Vmn1r87Q8R255 295 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Cd276Q8VE98 316 aa17.86■□□□□ 0.45
Shkbp1-201ENSMUST00000003857 Olfr1302Q8VGE9 315 aa17.86■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms