RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	CRHR1	P34998	444 aa		14	□□□□□ -0.17
PHGDH-231	ENST00000641939	STT3A	P46977	705 aa		14	□□□□□ -0.17
PHGDH-231	ENST00000641939	CYB561	P49447	251 aa		14	□□□□□ -0.17
PHGDH-231	ENST00000641939	FOLH1	Q04609	750 aa		14	□□□□□ -0.17
PHGDH-231	ENST00000641939	CCDC153	Q494R4	210 aa		14	□□□□□ -0.17
PHGDH-231	ENST00000641939	ZNF324B	Q6AW86	544 aa	Predicted RBP	14	□□□□□ -0.17
PHGDH-231	ENST00000641939	HSDL2	Q6YN16	418 aa		14	□□□□□ -0.17
PHGDH-231	ENST00000641939	GPRIN3	Q6ZVF9	776 aa		14	□□□□□ -0.17
PHGDH-231	ENST00000641939	PAGE2	Q7Z2X7	111 aa		14	□□□□□ -0.17
PHGDH-231	ENST00000641939	DNAJB8	Q8NHS0	232 aa		14	□□□□□ -0.17
PHGDH-231	ENST00000641939	SLC2A12	Q8TD20	617 aa		14	□□□□□ -0.17
PHGDH-231	ENST00000641939	NR4A3	Q92570	626 aa		14	□□□□□ -0.17
PHGDH-231	ENST00000641939	CCDC126	Q96EE4	140 aa		14	□□□□□ -0.17
PHGDH-231	ENST00000641939	SCMH1	Q96GD3	660 aa		14	□□□□□ -0.17
PHGDH-231	ENST00000641939	DGAT2	Q96PD7	388 aa		14	□□□□□ -0.17
PHGDH-231	ENST00000641939	MRPL1	Q9BYD6	325 aa	Known RBP	14	□□□□□ -0.17
PHGDH-231	ENST00000641939	OR8D2	Q9GZM6	311 aa		14	□□□□□ -0.17
PHGDH-231	ENST00000641939	TRIM45	Q9H8W5	580 aa	Predicted RBP	14	□□□□□ -0.17
PHGDH-231	ENST00000641939	WDR41	Q9HAD4	459 aa		14	□□□□□ -0.17
PHGDH-231	ENST00000641939	BRF2	Q9HAW0	419 aa		14	□□□□□ -0.17
PHGDH-231	ENST00000641939	KLHL1	Q9NR64	748 aa		14	□□□□□ -0.17
PHGDH-231	ENST00000641939	FARSB	Q9NSD9	589 aa	Known RBP	14	□□□□□ -0.17
PHGDH-231	ENST00000641939	STK38L	Q9Y2H1	464 aa		14	□□□□□ -0.17
PHGDH-231	ENST00000641939	GTF3C1	Q12789	2109 aa		14	□□□□□ -0.17
PHGDH-231	ENST00000641939	EML6	Q6ZMW3	1958 aa		14	□□□□□ -0.17
PHGDH-231	ENST00000641939	UTP20	O75691	2785 aa	Known RBP	13.99	□□□□□ -0.17
PHGDH-231	ENST00000641939		A0A1W2PR48	441 aa		13.99	□□□□□ -0.17
PHGDH-231	ENST00000641939		G3V2L1	256 aa		13.99	□□□□□ -0.17
PHGDH-231	ENST00000641939	PRKN	O60260	465 aa	Predicted RBP	13.99	□□□□□ -0.17
PHGDH-231	ENST00000641939	PRKRA	O75569	313 aa	Known RBP	13.99	□□□□□ -0.17
PHGDH-231	ENST00000641939	ITGA10	O75578	1167 aa		13.99	□□□□□ -0.17
PHGDH-231	ENST00000641939	AIFM1	O95831	613 aa		13.99	□□□□□ -0.17
PHGDH-231	ENST00000641939	DDAH2	O95865	285 aa		13.99	□□□□□ -0.17
PHGDH-231	ENST00000641939	PROC	P04070	461 aa		13.99	□□□□□ -0.17
PHGDH-231	ENST00000641939	KLK1	P06870	262 aa		13.99	□□□□□ -0.17
PHGDH-231	ENST00000641939	HLCS	P50747	726 aa		13.99	□□□□□ -0.17
PHGDH-231	ENST00000641939	PLIN5	Q00G26	463 aa		13.99	□□□□□ -0.17
PHGDH-231	ENST00000641939	WDR93	Q6P2C0	686 aa		13.99	□□□□□ -0.17
PHGDH-231	ENST00000641939	EMB	Q6PCB8	327 aa		13.99	□□□□□ -0.17
PHGDH-231	ENST00000641939	ZYG11A	Q6WRX3	759 aa		13.99	□□□□□ -0.17
PHGDH-231	ENST00000641939	METTL4	Q8N3J2	472 aa		13.99	□□□□□ -0.17
PHGDH-231	ENST00000641939	CDYL2	Q8N8U2	506 aa		13.99	□□□□□ -0.17
PHGDH-231	ENST00000641939	TMEM178A	Q8NBL3	297 aa		13.99	□□□□□ -0.17
PHGDH-231	ENST00000641939	RBM18	Q96H35	190 aa	Known RBP	13.99	□□□□□ -0.17
PHGDH-231	ENST00000641939	HES7	Q9BYE0	225 aa		13.99	□□□□□ -0.17
PHGDH-231	ENST00000641939	NMRK1	Q9NWW6	199 aa		13.99	□□□□□ -0.17
PHGDH-231	ENST00000641939	GRID1	Q9ULK0	1009 aa		13.99	□□□□□ -0.17
PHGDH-231	ENST00000641939	SLC12A4	Q9UP95	1085 aa		13.99	□□□□□ -0.17
PHGDH-231	ENST00000641939	MYO7B	Q6PIF6	2116 aa		13.99	□□□□□ -0.17
PHGDH-231	ENST00000641939	NBPF19	A0A087WUL8	3843 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	TLDC2	A0PJX2	215 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	ARHGAP10	A1A4S6	786 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	GLOD5	A6NK44	160 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	ESPN	B1AK53	854 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	MANBA	O00462	879 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	COPE	O14579	308 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	DYRK3	O43781	588 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	PLIN3	O60664	434 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	SEMA7A	O75326	666 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	SLC25A12	O75746	678 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	GPR75	O95800	540 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	KRT6A	P02538	564 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	KRT6B	P04259	564 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	SP1	P08047	785 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	NUDT17	P0C025	328 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	HSD3B1	P14060	373 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	ALOX15	P16050	662 aa	Predicted RBP	13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	KRT4	P19013	534 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	HSD3B2	P26439	372 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	HMOX2	P30519	316 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	KRT6C	P48668	564 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	TDGF1P3	P51864	188 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	PKNOX1	P55347	436 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	PMP22	Q01453	160 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	LCP2	Q13094	533 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	CCNYL2	Q5T2Q4	361 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	SLC25A25	Q6KCM7	469 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	COMMD6	Q7Z4G1	85 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	ZNF227	Q86WZ6	799 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	ST13P4	Q8IZP2	240 aa	Predicted RBP	13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	RIBC1	Q8N443	379 aa	Predicted RBP	13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	TMEM156	Q8N614	296 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	CCNYL1	Q8N7R7	359 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	ZNF321P	Q8N8H1	164 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	OR8K3	Q8NH51	312 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	OR2W6P	Q8NHA6	318 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	METTL6	Q8TCB7	284 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	ZNF721	Q8TF20	911 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	AEN	Q8WTP8	325 aa	Known RBP	13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	TMEM125	Q96AQ2	219 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	PELO	Q9BRX2	385 aa	Known RBP	13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	GSTO2	Q9H4Y5	243 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	MYOT	Q9UBF9	498 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	COPS7A	Q9UBW8	275 aa		13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	YARS2	Q9Y2Z4	477 aa	Known RBP	13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939		V9GYY5	206 aa	Predicted RBP	13.98	□□□□□ -0.17
PHGDH-231	ENST00000641939	TMEM200C	A6NKL6	621 aa		13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	WASHC1	A8K0Z3	465 aa		13.97	□□□□□ -0.17
PHGDH-231	ENST00000641939	NME2P1	O60361	137 aa		13.97	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms