RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 TLX1P31314 330 aaPredicted RBP24.91■■□□□ 1.58
VEGFA-231ENST00000640499 BUD31P41223 144 aaPredicted RBP24.91■■□□□ 1.58
VEGFA-231ENST00000640499 MAPK12P53778 367 aa24.91■■□□□ 1.58
VEGFA-231ENST00000640499 SERTAD2Q14140 314 aa24.91■■□□□ 1.58
VEGFA-231ENST00000640499 ELAVL1Q15717 326 aaKnown RBP24.91■■□□□ 1.58
VEGFA-231ENST00000640499 NDUFAF5Q5TEU4 345 aa24.91■■□□□ 1.58
VEGFA-231ENST00000640499 KANK2Q63ZY3 851 aa24.91■■□□□ 1.58
VEGFA-231ENST00000640499 CRLF3Q8IUI8 442 aa24.91■■□□□ 1.58
VEGFA-231ENST00000640499 ZNF321PQ8N8H1 164 aa24.91■■□□□ 1.58
VEGFA-231ENST00000640499 B3GNT7Q8NFL0 401 aa24.91■■□□□ 1.58
VEGFA-231ENST00000640499 PPWD1Q96BP3 646 aaKnown RBP24.91■■□□□ 1.58
VEGFA-231ENST00000640499 ZNF395Q9H8N7 513 aaPredicted RBP24.91■■□□□ 1.58
VEGFA-231ENST00000640499 SIRT5Q9NXA8 310 aa24.91■■□□□ 1.58
VEGFA-231ENST00000640499 CES1P1Q9UKY3 287 aa24.91■■□□□ 1.58
VEGFA-231ENST00000640499 HEMK1Q9Y5R4 338 aaPredicted RBP24.91■■□□□ 1.58
VEGFA-231ENST00000640499 DNAJC15Q9Y5T4 150 aa24.91■■□□□ 1.58
VEGFA-231ENST00000640499 WDR91A4D1P6 747 aa24.9■■□□□ 1.58
VEGFA-231ENST00000640499 GPR75O95800 540 aa24.9■■□□□ 1.58
VEGFA-231ENST00000640499 DDAH2O95865 285 aa24.9■■□□□ 1.58
VEGFA-231ENST00000640499 IFNA16P05015 189 aa24.9■■□□□ 1.58
VEGFA-231ENST00000640499 ST13P50502 369 aaKnown RBP24.9■■□□□ 1.58
VEGFA-231ENST00000640499 AP2B1P63010 937 aa24.9■■□□□ 1.58
VEGFA-231ENST00000640499 BTKQ06187 659 aa24.9■■□□□ 1.58
VEGFA-231ENST00000640499 GALNT18Q6P9A2 607 aa24.9■■□□□ 1.58
VEGFA-231ENST00000640499 PRICKLE2Q7Z3G6 844 aa24.9■■□□□ 1.58
VEGFA-231ENST00000640499 ZNF605Q86T29 641 aa24.9■■□□□ 1.58
VEGFA-231ENST00000640499 NUDCD3Q8IVD9 361 aa24.9■■□□□ 1.58
VEGFA-231ENST00000640499 ZADH2Q8N4Q0 377 aa24.9■■□□□ 1.58
VEGFA-231ENST00000640499 PNPLA2Q96AD5 504 aa24.9■■□□□ 1.58
VEGFA-231ENST00000640499 KCNK9Q9NPC2 374 aa24.9■■□□□ 1.58
VEGFA-231ENST00000640499 STMN3Q9NZ72 180 aa24.9■■□□□ 1.58
VEGFA-231ENST00000640499 PCDHA9Q9Y5H5 950 aa24.9■■□□□ 1.58
VEGFA-231ENST00000640499 SLC28A2O43868 658 aa24.89■■□□□ 1.58
VEGFA-231ENST00000640499 PRKNO60260 465 aaPredicted RBP24.89■■□□□ 1.58
VEGFA-231ENST00000640499 CRCPO75575 148 aa24.89■■□□□ 1.58
VEGFA-231ENST00000640499 WDPCPO95876 746 aa24.89■■□□□ 1.58
VEGFA-231ENST00000640499 F10P00742 488 aa24.89■■□□□ 1.58
VEGFA-231ENST00000640499 PLA2G2AP14555 144 aa24.89■■□□□ 1.58
VEGFA-231ENST00000640499 STT3AP46977 705 aa24.89■■□□□ 1.58
VEGFA-231ENST00000640499 WDR4P57081 412 aaKnown RBP24.89■■□□□ 1.58
VEGFA-231ENST00000640499 KIAA0040Q15053 153 aa24.89■■□□□ 1.58
VEGFA-231ENST00000640499 ACER2Q5QJU3 275 aa24.89■■□□□ 1.58
VEGFA-231ENST00000640499 Q6ZSR9 355 aa24.89■■□□□ 1.58
VEGFA-231ENST00000640499 OR2T11Q8NH01 316 aa24.89■■□□□ 1.58
VEGFA-231ENST00000640499 DOK4Q8TEW6 326 aa24.89■■□□□ 1.58
VEGFA-231ENST00000640499 HAS2Q92819 552 aa24.89■■□□□ 1.58
VEGFA-231ENST00000640499 NCLNQ969V3 563 aa24.89■■□□□ 1.58
VEGFA-231ENST00000640499 ARL8AQ96BM9 186 aa24.89■■□□□ 1.58
VEGFA-231ENST00000640499 C20orf27Q9GZN8 174 aa24.89■■□□□ 1.58
VEGFA-231ENST00000640499 HEY2Q9UBP5 337 aa24.89■■□□□ 1.58
VEGFA-231ENST00000640499 MCM8Q9UJA3 840 aa24.89■■□□□ 1.58
VEGFA-231ENST00000640499 B3GNT3Q9Y2A9 372 aa24.89■■□□□ 1.58
VEGFA-231ENST00000640499 TRAF6Q9Y4K3 522 aa24.89■■□□□ 1.58
VEGFA-231ENST00000640499 BIRC5O15392 142 aa24.88■■□□□ 1.57
VEGFA-231ENST00000640499 ITM2AO43736 263 aa24.88■■□□□ 1.57
VEGFA-231ENST00000640499 ZWINTO95229 277 aa24.88■■□□□ 1.57
VEGFA-231ENST00000640499 MAGOHP61326 146 aaKnown RBP24.88■■□□□ 1.57
VEGFA-231ENST00000640499 ZNF750Q32MQ0 723 aa24.88■■□□□ 1.57
VEGFA-231ENST00000640499 OR52E8Q6IFG1 317 aa24.88■■□□□ 1.57
VEGFA-231ENST00000640499 RNF165Q6ZSG1 346 aa24.88■■□□□ 1.57
VEGFA-231ENST00000640499 ARMC10Q8N2F6 343 aa24.88■■□□□ 1.57
VEGFA-231ENST00000640499 TMEM132CQ8N3T6 1108 aa24.88■■□□□ 1.57
VEGFA-231ENST00000640499 TM9SF4Q92544 642 aa24.88■■□□□ 1.57
VEGFA-231ENST00000640499 EPS8L2Q9H6S3 715 aa24.88■■□□□ 1.57
VEGFA-231ENST00000640499 ZDHHC2Q9UIJ5 367 aa24.88■■□□□ 1.57
VEGFA-231ENST00000640499 FIS1Q9Y3D6 152 aa24.88■■□□□ 1.57
VEGFA-231ENST00000640499 TMEM200CA6NKL6 621 aa24.87■■□□□ 1.57
VEGFA-231ENST00000640499 C17orf105B2RV13 164 aa24.87■■□□□ 1.57
VEGFA-231ENST00000640499 NPIPB8E9PQR5 432 aa24.87■■□□□ 1.57
VEGFA-231ENST00000640499 HRKO00198 91 aa24.87■■□□□ 1.57
VEGFA-231ENST00000640499 PCDH7O60245 1069 aa24.87■■□□□ 1.57
VEGFA-231ENST00000640499 LYPLA1O75608 230 aaPredicted RBP24.87■■□□□ 1.57
VEGFA-231ENST00000640499 SERPINB5P36952 375 aa24.87■■□□□ 1.57
VEGFA-231ENST00000640499 MLLT10P55197 1068 aa24.87■■□□□ 1.57
VEGFA-231ENST00000640499 TRA2BP62995 288 aaKnown RBP24.87■■□□□ 1.57
VEGFA-231ENST00000640499 SPIN4Q56A73 249 aa24.87■■□□□ 1.57
VEGFA-231ENST00000640499 BEST3Q8N1M1 668 aa24.87■■□□□ 1.57
VEGFA-231ENST00000640499 ZNF721Q8TF20 911 aa24.87■■□□□ 1.57
VEGFA-231ENST00000640499 EBPLQ9BY08 206 aa24.87■■□□□ 1.57
VEGFA-231ENST00000640499 CDCP1Q9H5V8 836 aa24.87■■□□□ 1.57
VEGFA-231ENST00000640499 CLCA3PQ9Y6N3 262 aa24.87■■□□□ 1.57
VEGFA-231ENST00000640499 TRBV11-1A0A0K0K1C0 115 aa24.86■■□□□ 1.57
VEGFA-231ENST00000640499 TMEM120BA0PK00 339 aa24.86■■□□□ 1.57
VEGFA-231ENST00000640499 SYNDIG1LA6NDD5 238 aa24.86■■□□□ 1.57
VEGFA-231ENST00000640499 PYCARD-AS1I3L0S3 204 aa24.86■■□□□ 1.57
VEGFA-231ENST00000640499 ALOX15P16050 662 aaPredicted RBP24.86■■□□□ 1.57
VEGFA-231ENST00000640499 PRPH2P23942 346 aa24.86■■□□□ 1.57
VEGFA-231ENST00000640499 TIA1P31483 386 aaKnown RBP eCLIP24.86■■□□□ 1.579e-14■■■□□ 15.1
VEGFA-231ENST00000640499 TLE1Q04724 770 aa24.86■■□□□ 1.57
VEGFA-231ENST00000640499 ACSM2AQ08AH3 577 aa24.86■■□□□ 1.57
VEGFA-231ENST00000640499 CHI3L2Q15782 390 aa24.86■■□□□ 1.57
VEGFA-231ENST00000640499 PRR30Q53SZ7 412 aaPredicted RBP24.86■■□□□ 1.57
VEGFA-231ENST00000640499 ABHD17BQ5VST6 288 aa24.86■■□□□ 1.57
VEGFA-231ENST00000640499 ACSM2BQ68CK6 577 aa24.86■■□□□ 1.57
VEGFA-231ENST00000640499 SLC48A1Q6P1K1 146 aa24.86■■□□□ 1.57
VEGFA-231ENST00000640499 RPS19BP1Q86WX3 136 aaKnown RBP24.86■■□□□ 1.57
VEGFA-231ENST00000640499 CLYBLQ8N0X4 340 aa24.86■■□□□ 1.57
VEGFA-231ENST00000640499 MORN4Q8NDC4 146 aa24.86■■□□□ 1.57
VEGFA-231ENST00000640499 OR14A16Q8NHC5 309 aa24.86■■□□□ 1.57
VEGFA-231ENST00000640499 PUM2Q8TB72 1066 aaKnown RBP eCLIP24.86■■□□□ 1.572e-10■■■■■ 37.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms