RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 DPY19L4Q7Z388 723 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 SPRED1Q7Z699 444 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 KIAA1328Q86T90 577 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.34□□□□□ -2.03
HMHB1-202ENST00000638299 ODF3L1Q8IXM7 274 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 EFCAB13Q8IY85 973 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 CCDC36Q8IYA8 594 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 CSGALNACT2Q8N6G5 542 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 SMRP1Q8NCR6 262 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 CCDC197Q8NCU1 140 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 SPATA4Q8NEY3 305 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 BHLHE22Q8NFJ8 381 aaPredicted RBP2.34□□□□□ -2.03
HMHB1-202ENST00000638299 OR1L4Q8NGR5 311 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 SPATA22Q8NHS9 363 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 WDR36Q8NI36 951 aaKnown RBP2.34□□□□□ -2.03
HMHB1-202ENST00000638299 KCNG3Q8TAE7 436 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 CACTINQ8WUQ7 758 aaKnown RBP2.34□□□□□ -2.03
HMHB1-202ENST00000638299 SCFD1Q8WVM8 642 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 TMEM37Q8WXS4 190 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 HAS1Q92839 578 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 HIST1H2ACQ93077 130 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 PIGTQ969N2 578 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 ZG16BQ96DA0 208 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 NXPE2Q96DL1 559 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 C19orf60Q96EN9 201 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 COQ2Q96H96 371 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 URB1-AS1Q96HZ7 61 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 ATP6V1G3Q96LB4 118 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 UHRF2Q96PU4 802 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 ACCSQ96QU6 501 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 OR1F2PQ96R84 312 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 PANX2Q96RD6 677 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 ERGIC2Q96RQ1 377 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 S1PR3Q99500 378 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 CHP1Q99653 195 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 RIOK1Q9BRS2 568 aaKnown RBP2.34□□□□□ -2.03
HMHB1-202ENST00000638299 NDUFAF3Q9BU61 184 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 DCLK3Q9C098 648 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 SHARPINQ9H0F6 387 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 TMEM185BQ9H7F4 350 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 SUDS3Q9H7L9 328 aaPredicted RBP2.34□□□□□ -2.03
HMHB1-202ENST00000638299 ZNF703Q9H7S9 590 aaPredicted RBP2.34□□□□□ -2.03
HMHB1-202ENST00000638299 KAT8Q9H7Z6 458 aaKnown RBP2.34□□□□□ -2.03
HMHB1-202ENST00000638299 UBTD1Q9HAC8 227 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 IL1RL2Q9HB29 575 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 SGK2Q9HBY8 427 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 POLE4Q9NR33 117 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.34□□□□□ -2.03
HMHB1-202ENST00000638299 SLC38A7Q9NVC3 462 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 SMOXQ9NWM0 555 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 C11orf21Q9P2W6 132 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 WNT16Q9UBV4 365 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 ERRFI1Q9UJM3 462 aaPredicted RBP2.34□□□□□ -2.03
HMHB1-202ENST00000638299 POMT2Q9UKY4 750 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 KCNS2Q9ULS6 477 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 STUB1Q9UNE7 303 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 MRPL11Q9Y3B7 192 aaKnown RBP2.34□□□□□ -2.03
HMHB1-202ENST00000638299 OR2W1Q9Y3N9 320 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 RHBDD3Q9Y3P4 386 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 ZNF175Q9Y473 711 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 SRPRBQ9Y5M8 271 aaKnown RBP2.34□□□□□ -2.03
HMHB1-202ENST00000638299 COLEC10Q9Y6Z7 277 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 R4GN57 208 aa2.34□□□□□ -2.03
HMHB1-202ENST00000638299 RNF123Q5XPI4 1314 aa2.34□□□□□ -2.04
HMHB1-202ENST00000638299 CENPJQ9HC77 1338 aaPredicted RBP2.34□□□□□ -2.04
HMHB1-202ENST00000638299 INSRP06213 1382 aa2.34□□□□□ -2.04
HMHB1-202ENST00000638299 NINLQ9Y2I6 1382 aa2.34□□□□□ -2.04
HMHB1-202ENST00000638299 FAM240BA0A1B0GVZ2 78 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 A0A1W2PRB8 838 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 ESYT2A0FGR8 921 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 MTMR11A4FU01 709 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 SERINC4A6NH21 518 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 OTOL1A6NHN0 477 aaPredicted RBP2.33□□□□□ -2.04
HMHB1-202ENST00000638299 LRRC30A6NM36 301 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 SNTNA6NMZ2 147 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 GABRR3A8MPY1 467 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 PRR32B1ATL7 298 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 E9PMD0 336 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 SGK494L7N484 410 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 NDUFS8O00217 210 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 ADAM10O14672 748 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 IMPA2O14732 288 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 EIF3HO15372 352 aaKnown RBP eCLIP2.33□□□□□ -2.04
HMHB1-202ENST00000638299 NBR2O15453 112 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 TLX3O43711 291 aaPredicted RBP2.33□□□□□ -2.04
HMHB1-202ENST00000638299 TIMM8AO60220 97 aaPredicted RBP2.33□□□□□ -2.04
HMHB1-202ENST00000638299 CIDEAO60543 219 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 WDR1O75083 606 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 E2F6O75461 281 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 APOHP02749 345 aaPredicted RBP2.33□□□□□ -2.04
HMHB1-202ENST00000638299 VTNP04004 478 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 CRYGCP07315 174 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 SERPINF2P08697 491 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 CCDC172P0C7W6 258 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 GSTT2P0CG29 244 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 GSTT2BP0CG30 244 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 CT45A8P0DMV1 189 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 CT45A9P0DMV2 189 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 FCGR1AP12314 374 aa2.33□□□□□ -2.04
HMHB1-202ENST00000638299 GP9P14770 177 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms