RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 MRPL57Q9BQC6 102 aaKnown RBP16.46■□□□□ 0.23
PNKP-230ENST00000638016 CCDC77Q9BR77 488 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 MRPL46Q9H2W6 279 aaKnown RBP16.46■□□□□ 0.23
PNKP-230ENST00000638016 RPF2Q9H7B2 306 aaKnown RBP16.46■□□□□ 0.23
PNKP-230ENST00000638016 DEPPQ9NTK1 212 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 ADGRE2Q9UHX3 823 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 ASB4Q9Y574 426 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 SPACA6W5XKT8 324 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 ZNF407Q9C0G0 2248 aa16.46■□□□□ 0.23
PNKP-230ENST00000638016 G3V3Y1 287 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 SLC19A2O60779 497 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 SMIM24O75264 130 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 AIFM1O95831 613 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 COL6A2P12110 1019 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 ZNF24P17028 368 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 PTX3P26022 381 aaPredicted RBP16.45■□□□□ 0.22
PNKP-230ENST00000638016 CNTFP26441 200 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 PTGER1P34995 402 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 DCTP40126 519 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 CA7P43166 264 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 STT3AP46977 705 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 SSR4P51571 173 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 RNF4P78317 190 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 PHEXP78562 749 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 SERTAD2Q14140 314 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 TCHHL1Q5QJ38 904 aaPredicted RBP16.45■□□□□ 0.22
PNKP-230ENST00000638016 TEX35Q5T0J7 233 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 LETMD1Q6P1Q0 360 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 ADGRD1Q6QNK2 874 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 IL20RBQ6UXL0 311 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 HSDL2Q6YN16 418 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 FGD2Q7Z6J4 655 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 MORN4Q8NDC4 146 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 ZNF483Q8TF39 744 aaPredicted RBP16.45■□□□□ 0.22
PNKP-230ENST00000638016 DAZLQ92904 295 aaKnown RBP16.45■□□□□ 0.22
PNKP-230ENST00000638016 TMEM125Q96AQ2 219 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 REPS1Q96D71 796 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 CCDC120Q96HB5 630 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 RASL10BQ96S79 203 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 HBEGFQ99075 208 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 NTMT1Q9BV86 223 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 MRPL1Q9BYD6 325 aaKnown RBP16.45■□□□□ 0.22
PNKP-230ENST00000638016 DDX31Q9H8H2 851 aaKnown RBP16.45■□□□□ 0.22
PNKP-230ENST00000638016 TEX10Q9NXF1 929 aaPredicted RBP16.45■□□□□ 0.22
PNKP-230ENST00000638016 MYOTQ9UBF9 498 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 ZNF225Q9UK10 706 aa16.45■□□□□ 0.22
PNKP-230ENST00000638016 A0A1B0GUH1 482 aa16.44■□□□□ 0.22
PNKP-230ENST00000638016 CCL21O00585 134 aa16.44■□□□□ 0.22
PNKP-230ENST00000638016 PROM1O43490 865 aa16.44■□□□□ 0.22
PNKP-230ENST00000638016 PEX1O43933 1283 aa16.44■□□□□ 0.22
PNKP-230ENST00000638016 FAM58BPP0C7Q3 252 aa16.44■□□□□ 0.22
PNKP-230ENST00000638016 CUL3Q13618 768 aa16.44■□□□□ 0.22
PNKP-230ENST00000638016 SLC29A2Q14542 456 aa16.44■□□□□ 0.22
PNKP-230ENST00000638016 FRG2Q64ET8 278 aa16.44■□□□□ 0.22
PNKP-230ENST00000638016 TRMT10CQ7L0Y3 403 aaKnown RBP16.44■□□□□ 0.22
PNKP-230ENST00000638016 C9orf40Q8IXQ3 194 aa16.44■□□□□ 0.22
PNKP-230ENST00000638016 FAM98AQ8NCA5 519 aaKnown RBP16.44■□□□□ 0.22
PNKP-230ENST00000638016 TRIM44Q96DX7 344 aaPredicted RBP16.44■□□□□ 0.22
PNKP-230ENST00000638016 DGAT2Q96PD7 388 aa16.44■□□□□ 0.22
PNKP-230ENST00000638016 FRG2BQ96QU4 278 aa16.44■□□□□ 0.22
PNKP-230ENST00000638016 CENPKQ9BS16 269 aa16.44■□□□□ 0.22
PNKP-230ENST00000638016 PHF11Q9UIL8 331 aa16.44■□□□□ 0.22
PNKP-230ENST00000638016 YARS2Q9Y2Z4 477 aaKnown RBP16.44■□□□□ 0.22
PNKP-230ENST00000638016 DNAJC13O75165 2243 aa16.43■□□□□ 0.22
PNKP-230ENST00000638016 NCOA6Q14686 2063 aaPredicted RBP16.43■□□□□ 0.22
PNKP-230ENST00000638016 A8MVJ9 347 aa16.43■□□□□ 0.22
PNKP-230ENST00000638016 FOXE1O00358 373 aaPredicted RBP16.43■□□□□ 0.22
PNKP-230ENST00000638016 ASNA1O43681 348 aa16.43■□□□□ 0.22
PNKP-230ENST00000638016 HS6ST1O60243 411 aa16.43■□□□□ 0.22
PNKP-230ENST00000638016 NR2F6P10588 404 aa16.43■□□□□ 0.22
PNKP-230ENST00000638016 PER3P56645 1201 aa16.43■□□□□ 0.22
PNKP-230ENST00000638016 ZNF750Q32MQ0 723 aa16.43■□□□□ 0.22
PNKP-230ENST00000638016 TTC19Q6DKK2 380 aaPredicted RBP16.43■□□□□ 0.22
PNKP-230ENST00000638016 METTL2BQ6P1Q9 378 aaKnown RBP16.43■□□□□ 0.22
PNKP-230ENST00000638016 CYP20A1Q6UW02 462 aa16.43■□□□□ 0.22
PNKP-230ENST00000638016 C3P1Q6ZMU1 363 aa16.43■□□□□ 0.22
PNKP-230ENST00000638016 TIFABQ6ZNK6 161 aa16.43■□□□□ 0.22
PNKP-230ENST00000638016 MILR1Q7Z6M3 343 aa16.43■□□□□ 0.22
PNKP-230ENST00000638016 NUDT13Q86X67 352 aa16.43■□□□□ 0.22
PNKP-230ENST00000638016 MMP21Q8N119 569 aa16.43■□□□□ 0.22
PNKP-230ENST00000638016 TRPC4APQ8TEL6 797 aa16.43■□□□□ 0.22
PNKP-230ENST00000638016 MZB1Q8WU39 189 aa16.43■□□□□ 0.22
PNKP-230ENST00000638016 ITLN2Q8WWU7 325 aaPredicted RBP16.43■□□□□ 0.22
PNKP-230ENST00000638016 ASB15Q8WXK1 588 aa16.43■□□□□ 0.22
PNKP-230ENST00000638016 SENP5Q96HI0 755 aaPredicted RBP16.43■□□□□ 0.22
PNKP-230ENST00000638016 TMEM237Q96Q45 408 aa16.43■□□□□ 0.22
PNKP-230ENST00000638016 CNPPD1Q9BV87 410 aa16.43■□□□□ 0.22
PNKP-230ENST00000638016 HPF1Q9NWY4 346 aa16.43■□□□□ 0.22
PNKP-230ENST00000638016 TBK1Q9UHD2 729 aa16.43■□□□□ 0.22
PNKP-230ENST00000638016 ERVK-11Q9UQG0 969 aa16.43■□□□□ 0.22
PNKP-230ENST00000638016 KLF13Q9Y2Y9 288 aaPredicted RBP16.43■□□□□ 0.22
PNKP-230ENST00000638016 PGRMC2O15173 223 aa16.42■□□□□ 0.22
PNKP-230ENST00000638016 DLX3O60479 287 aa16.42■□□□□ 0.22
PNKP-230ENST00000638016 OR4F21O95013 312 aa16.42■□□□□ 0.22
PNKP-230ENST00000638016 PDYNP01213 254 aa16.42■□□□□ 0.22
PNKP-230ENST00000638016 SHBGP04278 402 aa16.42■□□□□ 0.22
PNKP-230ENST00000638016 IGKV3-11P04433 115 aa16.42■□□□□ 0.22
PNKP-230ENST00000638016 KLK1P06870 262 aa16.42■□□□□ 0.22
PNKP-230ENST00000638016 ALOX15P16050 662 aaPredicted RBP16.42■□□□□ 0.22
PNKP-230ENST00000638016 GRNP28799 593 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms