RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 MAPKAPK3Q16644 382 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 TEX35Q5T0J7 233 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 CYP20A1Q6UW02 462 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 NUDT13Q86X67 352 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 ZNF808Q8N4W9 903 aaPredicted RBP17.1■□□□□ 0.33
CLN6-214ENST00000636314 TMEM156Q8N614 296 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 MORN4Q8NDC4 146 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 LURAP1Q96LR2 239 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 SERPINI1Q99574 410 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 TXLNGYQ9BZA5 131 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 OR8D2Q9GZM6 311 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 RPF2Q9H7B2 306 aaKnown RBP17.1■□□□□ 0.33
CLN6-214ENST00000636314 TRIM45Q9H8W5 580 aaPredicted RBP17.1■□□□□ 0.33
CLN6-214ENST00000636314 ZBTB26Q9HCK0 441 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 CHST11Q9NPF2 352 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 LYARQ9NX58 379 aaKnown RBP17.1■□□□□ 0.33
CLN6-214ENST00000636314 PSD3Q9NYI0 1048 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 FETUBQ9UGM5 382 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 ITGB1BP2Q9UKP3 347 aa17.1■□□□□ 0.33
CLN6-214ENST00000636314 ASPDHA6ND91 283 aa17.09■□□□□ 0.33
CLN6-214ENST00000636314 C17orf105B2RV13 164 aa17.09■□□□□ 0.33
CLN6-214ENST00000636314 FGF17O60258 216 aa17.09■□□□□ 0.33
CLN6-214ENST00000636314 NME2P1O60361 137 aa17.09■□□□□ 0.33
CLN6-214ENST00000636314 ETHE1O95571 254 aa17.09■□□□□ 0.33
CLN6-214ENST00000636314 OTCP00480 354 aa17.09■□□□□ 0.33
CLN6-214ENST00000636314 TAC1P20366 129 aa17.09■□□□□ 0.33
CLN6-214ENST00000636314 NME2P22392 152 aa17.09■□□□□ 0.33
CLN6-214ENST00000636314 HNRNPH2P55795 449 aaKnown RBP17.09■□□□□ 0.33
CLN6-214ENST00000636314 ALDH6A1Q02252 535 aaKnown RBP17.09■□□□□ 0.33
CLN6-214ENST00000636314 IFT88Q13099 833 aa17.09■□□□□ 0.33
CLN6-214ENST00000636314 GGTA1PQ4G0N0 100 aa17.09■□□□□ 0.33
CLN6-214ENST00000636314 C10orf62Q5T681 223 aaPredicted RBP17.09■□□□□ 0.33
CLN6-214ENST00000636314 FRG2Q64ET8 278 aa17.09■□□□□ 0.33
CLN6-214ENST00000636314 HSDL2Q6YN16 418 aa17.09■□□□□ 0.33
CLN6-214ENST00000636314 BNC2Q6ZN30 1099 aaPredicted RBP17.09■□□□□ 0.33
CLN6-214ENST00000636314 MILR1Q7Z6M3 343 aa17.09■□□□□ 0.33
CLN6-214ENST00000636314 LCA5Q86VQ0 697 aa17.09■□□□□ 0.33
CLN6-214ENST00000636314 CNPY4Q8N129 248 aa17.09■□□□□ 0.33
CLN6-214ENST00000636314 CYP4Z2PQ8N1L4 340 aa17.09■□□□□ 0.33
CLN6-214ENST00000636314 OR4F6Q8NGB9 312 aa17.09■□□□□ 0.33
CLN6-214ENST00000636314 ZNF483Q8TF39 744 aaPredicted RBP17.09■□□□□ 0.33
CLN6-214ENST00000636314 PTPMT1Q8WUK0 201 aaPredicted RBP17.09■□□□□ 0.33
CLN6-214ENST00000636314 ANKRD9Q96BM1 317 aaPredicted RBP17.09■□□□□ 0.33
CLN6-214ENST00000636314 MTFMTQ96DP5 389 aaKnown RBP17.09■□□□□ 0.33
CLN6-214ENST00000636314 FRMD6Q96NE9 622 aa17.09■□□□□ 0.33
CLN6-214ENST00000636314 DGAT2Q96PD7 388 aa17.09■□□□□ 0.33
CLN6-214ENST00000636314 FRG2BQ96QU4 278 aa17.09■□□□□ 0.33
CLN6-214ENST00000636314 ZNF717Q9BY31 904 aaPredicted RBP17.09■□□□□ 0.33
CLN6-214ENST00000636314 COPS7AQ9UBW8 275 aa17.09■□□□□ 0.33
CLN6-214ENST00000636314 PPT2Q9UMR5 302 aa17.09■□□□□ 0.33
CLN6-214ENST00000636314 ATG4BQ9Y4P1 393 aa17.09■□□□□ 0.33
CLN6-214ENST00000636314 PCNX1Q96RV3 2341 aa17.08■□□□□ 0.33
CLN6-214ENST00000636314 A0A0A6YYD5 115 aa17.08■□□□□ 0.32
CLN6-214ENST00000636314 PRKNO60260 465 aaPredicted RBP17.08■□□□□ 0.32
CLN6-214ENST00000636314 EEDO75530 441 aaKnown RBP17.08■□□□□ 0.32
CLN6-214ENST00000636314 PRKRAO75569 313 aaKnown RBP17.08■□□□□ 0.32
CLN6-214ENST00000636314 SEMA3DO95025 777 aa17.08■□□□□ 0.32
CLN6-214ENST00000636314 SBK3P0C264 359 aa17.08■□□□□ 0.32
CLN6-214ENST00000636314 NR2F6P10588 404 aa17.08■□□□□ 0.32
CLN6-214ENST00000636314 BSGP35613 385 aa17.08■□□□□ 0.32
CLN6-214ENST00000636314 STT3AP46977 705 aa17.08■□□□□ 0.32
CLN6-214ENST00000636314 SSR4P51571 173 aa17.08■□□□□ 0.32
CLN6-214ENST00000636314 PLIN5Q00G26 463 aa17.08■□□□□ 0.32
CLN6-214ENST00000636314 FOLH1Q04609 750 aa17.08■□□□□ 0.32
CLN6-214ENST00000636314 RBPJQ06330 500 aa17.08■□□□□ 0.32
CLN6-214ENST00000636314 C18orf63Q68DL7 685 aa17.08■□□□□ 0.32
CLN6-214ENST00000636314 MTFR2Q6P444 385 aa17.08■□□□□ 0.32
CLN6-214ENST00000636314 RPS27LQ71UM5 84 aaKnown RBP17.08■□□□□ 0.32
CLN6-214ENST00000636314 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.08■□□□□ 0.32
CLN6-214ENST00000636314 OR4N5Q8IXE1 308 aa17.08■□□□□ 0.32
CLN6-214ENST00000636314 EIF1ADQ8N9N8 165 aaKnown RBP17.08■□□□□ 0.32
CLN6-214ENST00000636314 SLC2A12Q8TD20 617 aa17.08■□□□□ 0.32
CLN6-214ENST00000636314 TANKQ92844 425 aa17.08■□□□□ 0.32
CLN6-214ENST00000636314 EPB41L4BQ9H329 900 aa17.08■□□□□ 0.32
CLN6-214ENST00000636314 ELOVL6Q9H5J4 265 aa17.08■□□□□ 0.32
CLN6-214ENST00000636314 DDX31Q9H8H2 851 aaKnown RBP17.08■□□□□ 0.32
CLN6-214ENST00000636314 WDR41Q9HAD4 459 aa17.08■□□□□ 0.32
CLN6-214ENST00000636314 TMEM216Q9P0N5 145 aa17.08■□□□□ 0.32
CLN6-214ENST00000636314 TBK1Q9UHD2 729 aa17.08■□□□□ 0.32
CLN6-214ENST00000636314 KLF13Q9Y2Y9 288 aaPredicted RBP17.08■□□□□ 0.32
CLN6-214ENST00000636314 YARS2Q9Y2Z4 477 aaKnown RBP17.08■□□□□ 0.32
CLN6-214ENST00000636314 GOLGA8RI6L899 631 aa17.07■□□□□ 0.32
CLN6-214ENST00000636314 DYRK3O43781 588 aa17.07■□□□□ 0.32
CLN6-214ENST00000636314 TMPRSS11DO60235 418 aa17.07■□□□□ 0.32
CLN6-214ENST00000636314 FAM58BPP0C7Q3 252 aa17.07■□□□□ 0.32
CLN6-214ENST00000636314 TSPAN8P19075 237 aa17.07■□□□□ 0.32
CLN6-214ENST00000636314 CA7P43166 264 aa17.07■□□□□ 0.32
CLN6-214ENST00000636314 CDH13P55290 713 aa17.07■□□□□ 0.32
CLN6-214ENST00000636314 HERVK_113P63132 956 aa17.07■□□□□ 0.32
CLN6-214ENST00000636314 IGLV3-21P80748 117 aaPredicted RBP17.07■□□□□ 0.32
CLN6-214ENST00000636314 ZNF630Q2M218 657 aaPredicted RBP17.07■□□□□ 0.32
CLN6-214ENST00000636314 MRM1Q6IN84 353 aaKnown RBP17.07■□□□□ 0.32
CLN6-214ENST00000636314 RPTNQ6XPR3 784 aa17.07■□□□□ 0.32
CLN6-214ENST00000636314 ZNF227Q86WZ6 799 aa17.07■□□□□ 0.32
CLN6-214ENST00000636314 TMEM151AQ8N4L1 468 aa17.07■□□□□ 0.32
CLN6-214ENST00000636314 ACMSDQ8TDX5 336 aa17.07■□□□□ 0.32
CLN6-214ENST00000636314 SREK1Q8WXA9 508 aaKnown RBP17.07■□□□□ 0.32
CLN6-214ENST00000636314 C1QTNF3Q9BXJ4 246 aa17.07■□□□□ 0.32
CLN6-214ENST00000636314 ERVK-6Q9BXR3 956 aa17.07■□□□□ 0.32
CLN6-214ENST00000636314 TSPAN10Q9H1Z9 355 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms