RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 OR4N5Q8IXE1 308 aa17.61■□□□□ 0.41
CLN6-213ENST00000636212 PLD6Q8N2A8 252 aaKnown RBP17.61■□□□□ 0.41
CLN6-213ENST00000636212 PSD4Q8NDX1 1056 aa17.61■□□□□ 0.41
CLN6-213ENST00000636212 UHMK1Q8TAS1 419 aaKnown RBP17.61■□□□□ 0.41
CLN6-213ENST00000636212 ANKRD9Q96BM1 317 aaPredicted RBP17.61■□□□□ 0.41
CLN6-213ENST00000636212 RASL10BQ96S79 203 aa17.61■□□□□ 0.41
CLN6-213ENST00000636212 MRPL57Q9BQC6 102 aaKnown RBP17.61■□□□□ 0.41
CLN6-213ENST00000636212 LIN28AQ9H9Z2 209 aaKnown RBP17.61■□□□□ 0.41
CLN6-213ENST00000636212 XPR1Q9UBH6 696 aa17.61■□□□□ 0.41
CLN6-213ENST00000636212 KLF2Q9Y5W3 355 aaPredicted RBP17.61■□□□□ 0.41
CLN6-213ENST00000636212 TRIM49D1C9J1S8 452 aa17.6■□□□□ 0.41
CLN6-213ENST00000636212 ACOT7O00154 380 aa17.6■□□□□ 0.41
CLN6-213ENST00000636212 OR10H2O60403 315 aa17.6■□□□□ 0.41
CLN6-213ENST00000636212 CDC40O60508 579 aaKnown RBP eCLIP17.6■□□□□ 0.41
CLN6-213ENST00000636212 SNRPAP09012 282 aaKnown RBP17.6■□□□□ 0.41
CLN6-213ENST00000636212 ALOX15P16050 662 aaPredicted RBP17.6■□□□□ 0.41
CLN6-213ENST00000636212 HK2P52789 917 aa17.6■□□□□ 0.41
CLN6-213ENST00000636212 GPR85P60893 370 aa17.6■□□□□ 0.41
CLN6-213ENST00000636212 IGLV3-21P80748 117 aaPredicted RBP17.6■□□□□ 0.41
CLN6-213ENST00000636212 FOLH1Q04609 750 aa17.6■□□□□ 0.41
CLN6-213ENST00000636212 IFT88Q13099 833 aa17.6■□□□□ 0.41
CLN6-213ENST00000636212 UBAP2Q5T6F2 1119 aaKnown RBP17.6■□□□□ 0.41
CLN6-213ENST00000636212 SP5Q6BEB4 398 aaPredicted RBP17.6■□□□□ 0.41
CLN6-213ENST00000636212 RTL4Q6ZR62 310 aa17.6■□□□□ 0.41
CLN6-213ENST00000636212 MDGA2Q7Z553 956 aa17.6■□□□□ 0.41
CLN6-213ENST00000636212 IFT20Q8IY31 132 aa17.6■□□□□ 0.41
CLN6-213ENST00000636212 ITLN2Q8WWU7 325 aaPredicted RBP17.6■□□□□ 0.41
CLN6-213ENST00000636212 MTFMTQ96DP5 389 aaKnown RBP17.6■□□□□ 0.41
CLN6-213ENST00000636212 NTMT1Q9BV86 223 aa17.6■□□□□ 0.41
CLN6-213ENST00000636212 MRPL46Q9H2W6 279 aaKnown RBP17.6■□□□□ 0.41
CLN6-213ENST00000636212 ZNF358Q9NW07 568 aa17.6■□□□□ 0.41
CLN6-213ENST00000636212 AHSPQ9NZD4 102 aa17.6■□□□□ 0.41
CLN6-213ENST00000636212 ARHGAP10A1A4S6 786 aa17.59■□□□□ 0.41
CLN6-213ENST00000636212 PROM1O43490 865 aa17.59■□□□□ 0.41
CLN6-213ENST00000636212 OR6B1O95007 311 aa17.59■□□□□ 0.41
CLN6-213ENST00000636212 FAM58BPP0C7Q3 252 aa17.59■□□□□ 0.41
CLN6-213ENST00000636212 NR2F6P10588 404 aa17.59■□□□□ 0.41
CLN6-213ENST00000636212 RFC3P40938 356 aa17.59■□□□□ 0.41
CLN6-213ENST00000636212 SOX3P41225 446 aa17.59■□□□□ 0.41
CLN6-213ENST00000636212 FRG2Q64ET8 278 aa17.59■□□□□ 0.41
CLN6-213ENST00000636212 C16orf47Q6ZP98 133 aaPredicted RBP17.59■□□□□ 0.41
CLN6-213ENST00000636212 RGS9BPQ6ZS82 235 aa17.59■□□□□ 0.41
CLN6-213ENST00000636212 GK5Q6ZS86 529 aa17.59■□□□□ 0.41
CLN6-213ENST00000636212 PAGE2Q7Z2X7 111 aa17.59■□□□□ 0.41
CLN6-213ENST00000636212 MILR1Q7Z6M3 343 aa17.59■□□□□ 0.41
CLN6-213ENST00000636212 ST13P4Q8IZP2 240 aaPredicted RBP17.59■□□□□ 0.41
CLN6-213ENST00000636212 CNPY4Q8N129 248 aa17.59■□□□□ 0.41
CLN6-213ENST00000636212 ZFP62Q8NB50 900 aaPredicted RBP17.59■□□□□ 0.41
CLN6-213ENST00000636212 C16orf52Q8NHV5 167 aa17.59■□□□□ 0.41
CLN6-213ENST00000636212 WDR20Q8TBZ3 569 aa17.59■□□□□ 0.41
CLN6-213ENST00000636212 SLC22A8Q8TCC7 542 aa17.59■□□□□ 0.41
CLN6-213ENST00000636212 DCAKDQ8WVC6 231 aa17.59■□□□□ 0.41
CLN6-213ENST00000636212 SREK1Q8WXA9 508 aaKnown RBP17.59■□□□□ 0.41
CLN6-213ENST00000636212 SENP5Q96HI0 755 aaPredicted RBP17.59■□□□□ 0.41
CLN6-213ENST00000636212 CDK15Q96Q40 435 aa17.59■□□□□ 0.41
CLN6-213ENST00000636212 FRG2BQ96QU4 278 aa17.59■□□□□ 0.41
CLN6-213ENST00000636212 DDX31Q9H8H2 851 aaKnown RBP17.59■□□□□ 0.41
CLN6-213ENST00000636212 CHST11Q9NPF2 352 aa17.59■□□□□ 0.41
CLN6-213ENST00000636212 PCTPQ9UKL6 214 aa17.59■□□□□ 0.41
CLN6-213ENST00000636212 PPT2Q9UMR5 302 aa17.59■□□□□ 0.41
CLN6-213ENST00000636212 ATG4BQ9Y4P1 393 aa17.59■□□□□ 0.41
CLN6-213ENST00000636212 IQANK1A0A1B0GTG1 560 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 TMEM200CA6NKL6 621 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 OR7A17O14581 309 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 HS6ST1O60243 411 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 WISP2O76076 250 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 SEMA3DO95025 777 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 ETHE1O95571 254 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 GPR75O95800 540 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 TAC1P20366 129 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 AGAP20933 346 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 ECHS1P30084 290 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 PTGS2P35354 604 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 BSGP35613 385 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 NEK2P51955 445 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 HNRNPH2P55795 449 aaKnown RBP17.58■□□□□ 0.4
CLN6-213ENST00000636212 HSF1Q00613 529 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 RNFT1Q5M7Z0 435 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 TEX35Q5T0J7 233 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 C6orf163Q5TEZ5 329 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 C18orf63Q68DL7 685 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 TRMT10CQ7L0Y3 403 aaKnown RBP17.58■□□□□ 0.4
CLN6-213ENST00000636212 SLC29A4Q7RTT9 530 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 ZNF321PQ8N8H1 164 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 GOLM1Q8NBJ4 401 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 OR52B6Q8NGF0 335 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 ZNF721Q8TF20 911 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 AGAP11Q8TF27 550 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 MARVELD3Q96A59 401 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 PPWD1Q96BP3 646 aaKnown RBP17.58■□□□□ 0.4
CLN6-213ENST00000636212 MTBPQ96DY7 904 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 FBXL20Q96IG2 436 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 SGCZQ96LD1 299 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 CNPPD1Q9BV87 410 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 ELOVL6Q9H5J4 265 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 RYDENQ9NUL5 291 aaKnown RBP17.58■□□□□ 0.4
CLN6-213ENST00000636212 NFU1Q9UMS0 254 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 MEMO1Q9Y316 297 aa17.58■□□□□ 0.4
CLN6-213ENST00000636212 A0A0A6YYD5 115 aa17.57■□□□□ 0.4
CLN6-213ENST00000636212 EEDO75530 441 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms