RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 RFTN2Q52LD8 501 aaPredicted RBP11.83□□□□□ -0.51
SYNGAP1-207ENST00000628646 ATG9BQ674R7 924 aa11.83□□□□□ -0.51
SYNGAP1-207ENST00000628646 ZNF614Q8N883 585 aa11.83□□□□□ -0.51
SYNGAP1-207ENST00000628646 ULBP3Q9BZM4 244 aa11.83□□□□□ -0.51
SYNGAP1-207ENST00000628646 PLXNA2O75051 1894 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 TRBC2A0A5B9 178 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 FAM149AA5PLN7 773 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 PDLIM1O00151 329 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 SCRG1O75711 98 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 FBLP22087 321 aaKnown RBP11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 DCAF12Q5T6F0 453 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 TTC23Q5W5X9 447 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 SLCO4C1Q6ZQN7 724 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 PRSS33Q8NF86 280 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 FAM122AQ96E09 287 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 KCNC2Q96PR1 638 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 PANX1Q96RD7 426 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 CNPPD1Q9BV87 410 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 GRIP2Q9C0E4 1043 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 DHCR7Q9UBM7 475 aaKnown RBP11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 PRMT3O60678 531 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 PCSK6P29122 969 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 PGDP52209 483 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 HPCAP84074 193 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 FAM174BQ3ZCQ3 159 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 SPIN4Q56A73 249 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 PERM1Q5SV97 790 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 SLC2A7Q6PXP3 512 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 ZNF786Q8N393 782 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 OR2A1Q8NGT9 310 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 TBCDQ9BTW9 1192 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 NTN4Q9HB63 628 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 PNPLA3Q9NST1 481 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 PCDHB3Q9Y5E6 796 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 A0A087WXM4 84 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 G6PDP11413 515 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 ARSFP54793 590 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 TAS2R50P59544 299 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 CSNK1G2P78368 415 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 SLC36A3Q495N2 470 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 STK32CQ86UX6 486 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 PEX11GQ96HA9 241 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 NTMT1Q9BV86 223 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 ADPRHL2Q9NX46 363 aa11.83□□□□□ -0.52
SYNGAP1-207ENST00000628646 HYKKA2RU49 373 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 ZSCAN9O15535 394 aaPredicted RBP11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 SEC24DO94855 1032 aaPredicted RBP11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 PRSS23O95084 383 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 H6PDO95479 791 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 MT-CO3P00414 261 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 HSD3B1P14060 373 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 ATP6V1B1P15313 513 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 NCK1P16333 377 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 HOXB9P17482 250 aaPredicted RBP11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 HSD3B2P26439 372 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 EPHA4P54764 986 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 SHISA6Q6ZSJ9 500 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 MSRB3Q8IXL7 192 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 PNO1Q9NRX1 252 aaKnown RBP11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 PCOLCE2Q9UKZ9 415 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 A0A1B0GVG6 124 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 PCNX2A6NKB5 2137 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 ZNF682O95780 498 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 ZNF888P0CJ79 500 aaPredicted RBP11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 NELFEP18615 380 aaKnown RBP11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 HTR1EP28566 365 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 OR1D4P47884 311 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 OR4D2P58180 307 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 SLAMF1Q13291 335 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 ADGRF3Q8IZF5 1079 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 CBR4Q8N4T8 237 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 LINC01555Q8NAE3 123 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 KCT2Q8NC54 265 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 TMIGD2Q96BF3 282 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 RAPGEFL1Q9UHV5 662 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 POMT2Q9UKY4 750 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 DLGAP4Q9Y2H0 992 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 SRPX2O60687 465 aaPredicted RBP11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 SLC14A1Q13336 389 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 RFX4Q33E94 735 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 HES3Q5TGS1 186 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 KHDRBS2Q5VWX1 349 aaKnown RBP11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 TBPL2Q6SJ96 375 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 ADAMTS16Q8TE57 1224 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 UBTD2Q8WUN7 234 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 FAM131CQ96AQ9 280 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 LOXL2Q9Y4K0 774 aa11.82□□□□□ -0.52
SYNGAP1-207ENST00000628646 MYO1GB0I1T2 1018 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 SGK494L7N484 410 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 RDH16O75452 317 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 MYF6P23409 242 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 JAK1P23458 1154 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 SLC5A2P31639 672 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 KRT20P35900 424 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 RPS15P62841 145 aaKnown RBP11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 USP51Q70EK9 711 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 FBXO30Q8TB52 745 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 PTCHD1Q96NR3 888 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 VPS4AQ9UN37 437 aa11.81□□□□□ -0.52
SYNGAP1-207ENST00000628646 FAF1Q9UNN5 650 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms