RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 NMRK1Q9NWW6 199 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 PSD3Q9NYI0 1048 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 NFU1Q9UMS0 254 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 RNF11Q9Y3C5 154 aa12.15□□□□□ -0.46
ATRX-208ENST00000622960 COL12A1Q99715 3063 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 MYOCOSA0A1B0GUC4 107 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 LRRC14BA6NHZ5 514 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 FGF17O60258 216 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 P04436 131 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 FAM58BPP0C7Q3 252 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 DCTP40126 519 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 HK2P52789 917 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 FOLH1Q04609 750 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 TBL3Q12788 808 aaKnown RBP12.14□□□□□ -0.47
ATRX-208ENST00000622960 FRG2Q64ET8 278 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 MILR1Q7Z6M3 343 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 MRGPRGQ86SM5 289 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 SULF2Q8IWU5 870 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 ST13P4Q8IZP2 240 aaPredicted RBP12.14□□□□□ -0.47
ATRX-208ENST00000622960 PLD6Q8N2A8 252 aaKnown RBP12.14□□□□□ -0.47
ATRX-208ENST00000622960 RNF175Q8N4F7 328 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 PTPMT1Q8WUK0 201 aaPredicted RBP12.14□□□□□ -0.47
ATRX-208ENST00000622960 GPR78Q96P69 363 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 FRG2BQ96QU4 278 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 RASL10BQ96S79 203 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 NTMT1Q9BV86 223 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 CNPPD1Q9BV87 410 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 SORBS1Q9BX66 1292 aaKnown RBP12.14□□□□□ -0.47
ATRX-208ENST00000622960 RYDENQ9NUL5 291 aaKnown RBP12.14□□□□□ -0.47
ATRX-208ENST00000622960 TINAGQ9UJW2 476 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 ZNF223Q9UK11 482 aaPredicted RBP12.14□□□□□ -0.47
ATRX-208ENST00000622960 PCTPQ9UKL6 214 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 PPT2Q9UMR5 302 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 SNX6Q9UNH7 406 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 STK38LQ9Y2H1 464 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 KLF2Q9Y5W3 355 aaPredicted RBP12.14□□□□□ -0.47
ATRX-208ENST00000622960 ICE1Q9Y2F5 2266 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 DOPEY1Q5JWR5 2465 aa12.14□□□□□ -0.47
ATRX-208ENST00000622960 SVILO95425 2214 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 CCDC151A5D8V7 595 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 HNRNPRO43390 633 aaKnown RBP12.13□□□□□ -0.47
ATRX-208ENST00000622960 COL8A1P27658 744 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 PIK3R1P27986 724 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 SOX3P41225 446 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 GPR85P60893 370 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 ART3Q13508 389 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 C3AR1Q16581 482 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 GGTA1PQ4G0N0 100 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 C18orf63Q68DL7 685 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 ZNF787Q6DD87 383 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 XKRXQ6PP77 449 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 RNF111Q6ZNA4 994 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 RGS9BPQ6ZS82 235 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 FAM47EQ6ZV65 393 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 SLC22A16Q86VW1 577 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 OR4N5Q8IXE1 308 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 DND1Q8IYX4 353 aaKnown RBP12.13□□□□□ -0.47
ATRX-208ENST00000622960 GOLM1Q8NBJ4 401 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 WDR20Q8TBZ3 569 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 DCAKDQ8WVC6 231 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 SREK1Q8WXA9 508 aaKnown RBP12.13□□□□□ -0.47
ATRX-208ENST00000622960 ANKRD9Q96BM1 317 aaPredicted RBP12.13□□□□□ -0.47
ATRX-208ENST00000622960 MTFMTQ96DP5 389 aaKnown RBP12.13□□□□□ -0.47
ATRX-208ENST00000622960 FBXL20Q96IG2 436 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 SGCZQ96LD1 299 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 CDK15Q96Q40 435 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 GAL3ST4Q96RP7 486 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 DDX31Q9H8H2 851 aaKnown RBP12.13□□□□□ -0.47
ATRX-208ENST00000622960 LIN28AQ9H9Z2 209 aaKnown RBP12.13□□□□□ -0.47
ATRX-208ENST00000622960 CHST11Q9NPF2 352 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 SEMA4BQ9NPR2 832 aaPredicted RBP12.13□□□□□ -0.47
ATRX-208ENST00000622960 SACM1LQ9NTJ5 587 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 ZNF358Q9NW07 568 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 ENTPD4Q9Y227 616 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 CLDN16Q9Y5I7 305 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 ZGRF1Q86YA3 2104 aa12.13□□□□□ -0.47
ATRX-208ENST00000622960 A0A0A6YYD5 115 aa12.12□□□□□ -0.47
ATRX-208ENST00000622960 GOLGA6L10A6NI86 522 aa12.12□□□□□ -0.47
ATRX-208ENST00000622960 OR7A17O14581 309 aa12.12□□□□□ -0.47
ATRX-208ENST00000622960 PROM1O43490 865 aa12.12□□□□□ -0.47
ATRX-208ENST00000622960 HS6ST1O60243 411 aa12.12□□□□□ -0.47
ATRX-208ENST00000622960 OR6B1O95007 311 aa12.12□□□□□ -0.47
ATRX-208ENST00000622960 GPR75O95800 540 aa12.12□□□□□ -0.47
ATRX-208ENST00000622960 TPOP07202 933 aa12.12□□□□□ -0.47
ATRX-208ENST00000622960 RHOXF2BP0C7M4 288 aa12.12□□□□□ -0.47
ATRX-208ENST00000622960 ECHS1P30084 290 aa12.12□□□□□ -0.47
ATRX-208ENST00000622960 PTGS2P35354 604 aa12.12□□□□□ -0.47
ATRX-208ENST00000622960 RFC3P40938 356 aa12.12□□□□□ -0.47
ATRX-208ENST00000622960 NEK2P51955 445 aa12.12□□□□□ -0.47
ATRX-208ENST00000622960 HNRNPH2P55795 449 aaKnown RBP12.12□□□□□ -0.47
ATRX-208ENST00000622960 IGLV3-21P80748 117 aaPredicted RBP12.12□□□□□ -0.47
ATRX-208ENST00000622960 MPEG1Q2M385 716 aa12.12□□□□□ -0.47
ATRX-208ENST00000622960 CCNYL2Q5T2Q4 361 aa12.12□□□□□ -0.47
ATRX-208ENST00000622960 UBAP2Q5T6F2 1119 aaKnown RBP12.12□□□□□ -0.47
ATRX-208ENST00000622960 NDUFAF5Q5TEU4 345 aa12.12□□□□□ -0.47
ATRX-208ENST00000622960 HLA-DQA1Q5Y7H0 255 aa12.12□□□□□ -0.47
ATRX-208ENST00000622960 ARHGAP11AQ6P4F7 1023 aa12.12□□□□□ -0.47
ATRX-208ENST00000622960 Q6ZPB1 254 aaPredicted RBP12.12□□□□□ -0.47
ATRX-208ENST00000622960 MDGA2Q7Z553 956 aa12.12□□□□□ -0.47
ATRX-208ENST00000622960 SIAH3Q8IW03 269 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms