RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 BSPRYQ5W0U4 402 aa4.16□□□□□ -1.74
CPNE3-213ENST00000622183 CDC42EP5Q6NZY7 148 aa4.16□□□□□ -1.74
CPNE3-213ENST00000622183 ISLR2Q6UXK2 745 aa4.16□□□□□ -1.74
CPNE3-213ENST00000622183 ADGRD2Q7Z7M1 963 aa4.16□□□□□ -1.74
CPNE3-213ENST00000622183 ITIH5Q86UX2 942 aa4.16□□□□□ -1.74
CPNE3-213ENST00000622183 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.16□□□□□ -1.74
CPNE3-213ENST00000622183 TEX9Q8N6V9 391 aa4.16□□□□□ -1.74
CPNE3-213ENST00000622183 RNF148Q8N7C7 305 aa4.16□□□□□ -1.74
CPNE3-213ENST00000622183 COLGALT1Q8NBJ5 622 aa4.16□□□□□ -1.74
CPNE3-213ENST00000622183 NUP37Q8NFH4 326 aa4.16□□□□□ -1.74
CPNE3-213ENST00000622183 OR56B1Q8NGI3 324 aa4.16□□□□□ -1.74
CPNE3-213ENST00000622183 OR6F1Q8NGZ6 308 aa4.16□□□□□ -1.74
CPNE3-213ENST00000622183 DQX1Q8TE96 717 aaKnown RBP4.16□□□□□ -1.74
CPNE3-213ENST00000622183 TCP11Q8WWU5 503 aa4.16□□□□□ -1.74
CPNE3-213ENST00000622183 HIST1H2ACQ93077 130 aa4.16□□□□□ -1.74
CPNE3-213ENST00000622183 C16orf58Q96GQ5 468 aa4.16□□□□□ -1.74
CPNE3-213ENST00000622183 NSMCE3Q96MG7 304 aa4.16□□□□□ -1.74
CPNE3-213ENST00000622183 CBWD1Q9BRT8 395 aa4.16□□□□□ -1.74
CPNE3-213ENST00000622183 CXXC4Q9H2H0 198 aa4.16□□□□□ -1.74
CPNE3-213ENST00000622183 B3GAT2Q9NPZ5 323 aa4.16□□□□□ -1.74
CPNE3-213ENST00000622183 GDF3Q9NR23 364 aa4.16□□□□□ -1.74
CPNE3-213ENST00000622183 BARHL2Q9NY43 387 aa4.16□□□□□ -1.74
CPNE3-213ENST00000622183 CNOT2Q9NZN8 540 aaKnown RBP4.16□□□□□ -1.74
CPNE3-213ENST00000622183 PLA2G4CQ9UP65 541 aa4.16□□□□□ -1.74
CPNE3-213ENST00000622183 LOC105371242A0A075B767 164 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.15□□□□□ -1.75
CPNE3-213ENST00000622183 RGSL1A5PLK6 1076 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 OR5H15A6NDH6 313 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 KPNA7A9QM74 516 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 CSO75390 466 aaKnown RBP4.15□□□□□ -1.75
CPNE3-213ENST00000622183 SELEP16581 610 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 HOXB6P17509 224 aaKnown RBP4.15□□□□□ -1.75
CPNE3-213ENST00000622183 DNAJB1P25685 340 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 CCND2P30279 289 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 FCGR2BP31994 310 aaPredicted RBP4.15□□□□□ -1.75
CPNE3-213ENST00000622183 FCGR2CP31995 323 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 CRYBA2P53672 197 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 CDKL1Q00532 357 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 ZNF177Q13360 481 aaPredicted RBP4.15□□□□□ -1.75
CPNE3-213ENST00000622183 KARSQ15046 597 aaKnown RBP4.15□□□□□ -1.75
CPNE3-213ENST00000622183 TRADDQ15628 312 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 KLHL22Q53GT1 634 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 FASTKD1Q53R41 847 aaKnown RBP4.15□□□□□ -1.75
CPNE3-213ENST00000622183 CMPK2Q5EBM0 449 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 LIPJQ5W064 366 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 NEPROQ6NW34 567 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 LCLAT1Q6UWP7 414 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 FAM159AQ6UWV7 190 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 ZNF730Q6ZMV8 503 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 Q6ZRG5 221 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 BNIPLQ7Z465 357 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 LRRC17Q8N6Y2 441 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 GVQW1Q8N7I0 195 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 P3H4Q92791 437 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 C11orf52Q96A22 123 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 MRPL24Q96A35 216 aaKnown RBP4.15□□□□□ -1.75
CPNE3-213ENST00000622183 DCTN5Q9BTE1 182 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 BARHL1Q9BZE3 327 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 RAB17Q9H0T7 212 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 NMUR1Q9HB89 426 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 NGBQ9NPG2 151 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 HPS4Q9NQG7 708 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 TEX10Q9NXF1 929 aaPredicted RBP4.15□□□□□ -1.75
CPNE3-213ENST00000622183 NDE1Q9NXR1 346 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 ERVK-18Q9QC07 812 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 CLIP2Q9UDT6 1046 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 BAIAP2L1Q9UHR4 511 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 RNF215Q9Y6U7 377 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 ARID2Q68CP9 1835 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 FGD5Q6ZNL6 1462 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 FAM205AQ6ZU69 1335 aa4.15□□□□□ -1.75
CPNE3-213ENST00000622183 ZNF821O75541 412 aaPredicted RBP4.14□□□□□ -1.75
CPNE3-213ENST00000622183 PTBP3O95758 552 aaKnown RBP4.14□□□□□ -1.75
CPNE3-213ENST00000622183 PROS1P07225 676 aa4.14□□□□□ -1.75
CPNE3-213ENST00000622183 GNSP15586 552 aa4.14□□□□□ -1.75
CPNE3-213ENST00000622183 PRDX6P30041 224 aa4.14□□□□□ -1.75
CPNE3-213ENST00000622183 PKLRP30613 574 aa4.14□□□□□ -1.75
CPNE3-213ENST00000622183 RPL9P32969 192 aaKnown RBP4.14□□□□□ -1.75
CPNE3-213ENST00000622183 ACADSBP45954 432 aa4.14□□□□□ -1.75
CPNE3-213ENST00000622183 SLC6A8P48029 635 aa4.14□□□□□ -1.75
CPNE3-213ENST00000622183 NDST2P52849 883 aa4.14□□□□□ -1.75
CPNE3-213ENST00000622183 RPL27P61353 136 aaKnown RBP4.14□□□□□ -1.75
CPNE3-213ENST00000622183 RBBP4Q09028 425 aa4.14□□□□□ -1.75
CPNE3-213ENST00000622183 DPYSQ14117 519 aa4.14□□□□□ -1.75
CPNE3-213ENST00000622183 KIAA0141Q14154 515 aaPredicted RBP4.14□□□□□ -1.75
CPNE3-213ENST00000622183 PDIA5Q14554 519 aa4.14□□□□□ -1.75
CPNE3-213ENST00000622183 IL23RQ5VWK5 629 aa4.14□□□□□ -1.75
CPNE3-213ENST00000622183 RAET1GQ6H3X3 334 aa4.14□□□□□ -1.75
CPNE3-213ENST00000622183 IRGCQ6NXR0 463 aa4.14□□□□□ -1.75
CPNE3-213ENST00000622183 SYVN1Q86TM6 617 aa4.14□□□□□ -1.75
CPNE3-213ENST00000622183 YRDCQ86U90 279 aaKnown RBP4.14□□□□□ -1.75
CPNE3-213ENST00000622183 ZNF614Q8N883 585 aa4.14□□□□□ -1.75
CPNE3-213ENST00000622183 OR2T6Q8NHC8 308 aa4.14□□□□□ -1.75
CPNE3-213ENST00000622183 HCAR2Q8TDS4 363 aa4.14□□□□□ -1.75
CPNE3-213ENST00000622183 TMEM45BQ96B21 275 aa4.14□□□□□ -1.75
CPNE3-213ENST00000622183 ART5Q96L15 291 aa4.14□□□□□ -1.75
CPNE3-213ENST00000622183 NMNAT2Q9BZQ4 307 aa4.14□□□□□ -1.75
CPNE3-213ENST00000622183 TMEM231Q9H6L2 316 aa4.14□□□□□ -1.75
CPNE3-213ENST00000622183 KCNK13Q9HB14 408 aa4.14□□□□□ -1.75
CPNE3-213ENST00000622183 IL20RAQ9UHF4 553 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms