RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 TSPAN6O43657 245 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 IRS1P35568 1242 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 ARPC4P59998 168 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 OCLNQ16625 522 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 CST9Q5W186 159 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 C22orf42Q6IC83 251 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 TRIM48Q8IWZ4 208 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 OR8J1Q8NGP2 316 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 OR51B5Q9H339 312 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 GPBP1L1Q9HC44 474 aaPredicted RBP18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 RPRD1BQ9NQG5 326 aaKnown RBP18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 KCNE2Q9Y6J6 123 aa18.63■□□□□ 0.57
PDLIM3-212ENST00000620787 H3BN98 237 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 GPC1P35052 558 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 RPL3P39023 403 aaKnown RBP18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 PNLIPRP1P54315 467 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 WDR5P61964 334 aaKnown RBP18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 DPY19L3Q6ZPD9 716 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 HSD11B1LQ7Z5J1 315 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 UBASH3BQ8TF42 649 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 TRIM63Q969Q1 353 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 TMEM159Q96B96 161 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 PDXPQ96GD0 296 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 DHRS1Q96LJ7 313 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 CPEB1Q9BZB8 566 aaKnown RBP18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 FOXE1O00358 373 aaPredicted RBP18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 OR10H3O60404 316 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 OLFM2O95897 454 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 TGFB1P01137 390 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 TP53P04637 393 aaPredicted RBP18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 PRKAR2AP13861 404 aaKnown RBP18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 CPEP16870 476 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 HLA-DMAP28067 261 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 EFR3AQ14156 821 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 SLBPQ14493 270 aaKnown RBP eCLIP18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 GPNMBQ14956 572 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 HEPACAMQ14CZ8 416 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 DCST1Q5T197 706 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 TCTN3Q6NUS6 607 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 PGBD2Q6P3X8 592 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 MMP21Q8N119 569 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 CELF5Q8N6W0 485 aaKnown RBP18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 KIAA1143Q96AT1 154 aaPredicted RBP18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 FAM83CQ9BQN1 747 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 FAM83DQ9H4H8 585 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 HCN2Q9UL51 889 aa18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 DIMT1Q9UNQ2 313 aaKnown RBP18.62■□□□□ 0.57
PDLIM3-212ENST00000620787 FAAHO00519 579 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 TSPAN19P0C672 248 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 SSTR4P31391 388 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 ETV5P41161 510 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 GSTM5P46439 218 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 ETV1P50549 477 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 ZNF157P51786 506 aaPredicted RBP18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 CTSCP53634 463 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 TCTN1Q2MV58 587 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 PYDC2Q56P42 97 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 DDI2Q5TDH0 399 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 TMIGD1Q6UXZ0 262 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 HSDL2Q6YN16 418 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 USP30Q70CQ3 517 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 DDX53Q86TM3 631 aaKnown RBP18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 TCTE3Q8IZS6 198 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 UBE2J2Q8N2K1 259 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 CAMKK1Q8N5S9 505 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 OR52I1Q8NGK6 324 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 TMEM203Q969S6 136 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 MRPL9Q9BYD2 267 aaKnown RBP18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 POLR2J3Q9H1A7 115 aaKnown RBP18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 CXorf36Q9H7Y0 433 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 HS3ST2Q9Y278 367 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 MYOFQ9NZM1 2061 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 MTCL1Q9Y4B5 1905 aaKnown RBP18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 A0A0G2JMP0 313 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 SLC9A3P48764 834 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 BNC1Q01954 994 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 QPRTQ15274 297 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 LIX1LQ8IVB5 337 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 CRIPAKQ8N1N5 446 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 IQCF1Q8N6M8 205 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 CHST14Q8NCH0 376 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 LMLNQ96KR4 655 aa18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 YARS2Q9Y2Z4 477 aaKnown RBP18.61■□□□□ 0.57
PDLIM3-212ENST00000620787 SLC5A10A0PJK1 596 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 PRKYO43930 277 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 BCHEP06276 602 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 KLK1P06870 262 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 CHRM5P08912 532 aaPredicted RBP18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 CTSAP10619 480 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 UQCRC2P22695 453 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 SDC2P34741 201 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 TBPL1P62380 186 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 RPS26P62854 115 aaKnown RBP18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 PRKCZQ05513 592 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 MADCAM1Q13477 382 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 MPPE1Q53F39 396 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 ZNF628Q5EBL2 1059 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 UNC5DQ6UXZ4 953 aa18.6■□□□□ 0.57
PDLIM3-212ENST00000620787 CADM2Q8N3J6 435 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms