RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	MS4A8	Q9BY19	250 aa		10.65	□□□□□ -0.71
TP53-223	ENST00000618944	MRO	Q9BYG7	248 aa		10.65	□□□□□ -0.71
TP53-223	ENST00000618944	LHX9	Q9NQ69	397 aa		10.65	□□□□□ -0.71
TP53-223	ENST00000618944	ICK	Q9UPZ9	632 aa		10.65	□□□□□ -0.71
TP53-223	ENST00000618944	MFN2	O95140	757 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	PAK4	O96013	591 aa	Predicted RBP	10.64	□□□□□ -0.71
TP53-223	ENST00000618944	OR12D1	P0DN82	309 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	PXN	P49023	591 aa	Predicted RBP	10.64	□□□□□ -0.71
TP53-223	ENST00000618944	CRISP1	P54107	249 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	PRKAG1	P54619	331 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	CDC42	P60953	191 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	KCNC4	Q03721	635 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	MLIP	Q5VWP3	458 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	METRNL	Q641Q3	311 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	SLC46A3	Q7Z3Q1	461 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	UBE3D	Q7Z6J8	389 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	OR4D11	Q8NGI4	311 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	OR5D16	Q8NGK9	328 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	XAGE5	Q8WWM1	108 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	NEURL3	Q96EH8	262 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	COX14	Q96I36	57 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	COL21A1	Q96P44	957 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	YIPF4	Q9BSR8	244 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	RHBG	Q9H310	441 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	CERS4	Q9HA82	394 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	ABCB10	Q9NRK6	738 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	PTPRS	Q13332	1948 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944		A0A1W2PPV9	198 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	ANHX	E9PGG2	379 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	HMGN4	O00479	90 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	MID1	O15344	667 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	ZW10	O43264	779 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	SLC28A2	O43868	658 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	OR10H3	O60404	316 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	COQ9	O75208	318 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	DNTT	P04053	509 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	ALPPL2	P10696	532 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	ACP5	P13686	325 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	CD97	P48960	835 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	CCT3	P49368	545 aa	Known RBP	10.64	□□□□□ -0.71
TP53-223	ENST00000618944	RGS6	P49758	472 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	RPS3A	P61247	264 aa	Known RBP	10.64	□□□□□ -0.71
TP53-223	ENST00000618944	SYPL1	Q16563	259 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	ZNF404	Q494X3	552 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	PIP5KL1	Q5T9C9	394 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	TCTN3	Q6NUS6	607 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	RTL10	Q7L3V2	364 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	BCDIN3D	Q7Z5W3	292 aa	Known RBP	10.64	□□□□□ -0.71
TP53-223	ENST00000618944	SLC22A16	Q86VW1	577 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	LACC1	Q8IV20	430 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	LINC01555	Q8NAE3	123 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	SP7	Q8TDD2	431 aa	Predicted RBP	10.64	□□□□□ -0.71
TP53-223	ENST00000618944		Q96MT0	163 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	C17orf62	Q9BQA9	187 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	KCNK12	Q9HB15	430 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	SIRT3	Q9NTG7	399 aa	Predicted RBP	10.64	□□□□□ -0.71
TP53-223	ENST00000618944	TRPC4	Q9UBN4	977 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	HCN2	Q9UL51	889 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	TMCC3	Q9ULS5	477 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	PLEKHM1	Q9Y4G2	1056 aa		10.64	□□□□□ -0.71
TP53-223	ENST00000618944	ZAR1L	A6NP61	321 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	C1QTNF3-AMACR	E9PGA6	284 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944		H3BN98	237 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	DSCR3	O14972	297 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	CNOT3	O75175	753 aa	Known RBP	10.63	□□□□□ -0.71
TP53-223	ENST00000618944	RPLP0	P05388	317 aa	Known RBP	10.63	□□□□□ -0.71
TP53-223	ENST00000618944	SLC35G4	P0C7Q5	338 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	POR	P16435	677 aa	Predicted RBP	10.63	□□□□□ -0.71
TP53-223	ENST00000618944	MAG	P20916	626 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	OPRD1	P41143	372 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	SEPHS1	P49903	392 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	PCBP4	P57723	403 aa	Known RBP	10.63	□□□□□ -0.71
TP53-223	ENST00000618944	PIN1	Q13526	163 aa	Predicted RBP	10.63	□□□□□ -0.71
TP53-223	ENST00000618944	DOC2B	Q14184	412 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	TCEA2	Q15560	299 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	INAVA	Q3KP66	663 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	ZNF770	Q6IQ21	691 aa	Predicted RBP	10.63	□□□□□ -0.71
TP53-223	ENST00000618944	ADAMTSL4	Q6UY14	1074 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	WDR53	Q7Z5U6	358 aa	Predicted RBP	10.63	□□□□□ -0.71
TP53-223	ENST00000618944	DSG4	Q86SJ6	1040 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	SMPDL3A	Q92484	453 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	FGF13	Q92913	245 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	C12orf66	Q96MD2	445 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	ASB16	Q96NS5	453 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	MIR1-1HG	Q9H1L0	117 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	SERHL2	Q9H4I8	314 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	KLHL31	Q9H511	634 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	IMP3	Q9NV31	184 aa	Known RBP	10.63	□□□□□ -0.71
TP53-223	ENST00000618944	CLN6	Q9NWW5	311 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	FTSJ1	Q9UET6	329 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	MOSPD1	Q9UJG1	213 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	KCNK6	Q9Y257	313 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	IFT52	Q9Y366	437 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	TCF20	Q9UGU0	1960 aa	Known RBP	10.63	□□□□□ -0.71
TP53-223	ENST00000618944	GOLGA4	Q13439	2230 aa	Known RBP	10.63	□□□□□ -0.71
TP53-223	ENST00000618944	NDUFS4	O43181	175 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	ADAM23	O75077	832 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	ENTPD6	O75354	484 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	CKMT1A	P12532	417 aa		10.63	□□□□□ -0.71
TP53-223	ENST00000618944	CD72	P21854	359 aa		10.63	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms