RNA–Protein interactions for RNA: ENST00000618700.4

UPF3A-211, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 1,210 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-211ENST00000618700 THOC1Q96FV9 657 aaKnown RBP18.51■□□□□ 0.55
UPF3A-211ENST00000618700 EGLN2Q96KS0 407 aa18.51■□□□□ 0.55
UPF3A-211ENST00000618700 TSSK3Q96PN8 268 aa18.51■□□□□ 0.55
UPF3A-211ENST00000618700 MESP1Q9BRJ9 268 aa18.51■□□□□ 0.55
UPF3A-211ENST00000618700 KCNK13Q9HB14 408 aa18.51■□□□□ 0.55
UPF3A-211ENST00000618700 NECTIN3Q9NQS3 549 aa18.51■□□□□ 0.55
UPF3A-211ENST00000618700 HEY2Q9UBP5 337 aa18.51■□□□□ 0.55
UPF3A-211ENST00000618700 CES1P1Q9UKY3 287 aa18.51■□□□□ 0.55
UPF3A-211ENST00000618700 EXO1Q9UQ84 846 aaKnown RBP18.51■□□□□ 0.55
UPF3A-211ENST00000618700 EIF3LQ9Y262 564 aaKnown RBP18.51■□□□□ 0.55
UPF3A-211ENST00000618700 HS3ST3B1Q9Y662 390 aa18.51■□□□□ 0.55
UPF3A-211ENST00000618700 KMT2BQ9UMN6 2715 aaPredicted RBP18.51■□□□□ 0.55
UPF3A-211ENST00000618700 A0A1W2PQ72 361 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 TCRBV16S1A1N1A0A5B0 115 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 GLOD5A6NK44 160 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 SRRM3A6NNA2 597 aaPredicted RBP18.5■□□□□ 0.55
UPF3A-211ENST00000618700 WASHC1A8K0Z3 465 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 SOCS6O14544 535 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 C8orf89P0DMQ9 161 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 G6PDP11413 515 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 DDCP20711 480 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 PPP2R1BP30154 601 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 DIO3P55073 304 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 GNGT1P63211 74 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 IGLV3-21P80748 117 aaPredicted RBP18.5■□□□□ 0.55
UPF3A-211ENST00000618700 MC1RQ01726 317 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 LSM12Q3MHD2 195 aaKnown RBP18.5■□□□□ 0.55
UPF3A-211ENST00000618700 LANCL3Q6ZV70 420 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 ACAD11Q709F0 780 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 SPATA19Q7Z5L4 167 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 CEP70Q8NHQ1 597 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 CLHC1Q8NHS4 586 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 KCTD12Q96CX2 325 aaKnown RBP18.5■□□□□ 0.55
UPF3A-211ENST00000618700 PTCHD1Q96NR3 888 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 CCDC28BQ9BUN5 200 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 TCF7L2Q9NQB0 619 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 AIG1Q9NVV5 245 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 EHD3Q9NZN3 535 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 BAIAP2L1Q9UHR4 511 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 DCTN4Q9UJW0 460 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 LAMA5O15230 3695 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 PCSK5Q92824 1860 aa18.5■□□□□ 0.55
UPF3A-211ENST00000618700 EPG5Q9HCE0 2579 aa18.49■□□□□ 0.55
UPF3A-211ENST00000618700 SCN2AQ99250 2005 aa18.49■□□□□ 0.55
UPF3A-211ENST00000618700 LOC102723996A0A087X1L8 192 aa18.49■□□□□ 0.55
UPF3A-211ENST00000618700 SYNDIG1LA6NDD5 238 aa18.49■□□□□ 0.55
UPF3A-211ENST00000618700 LDB3O75112 727 aa18.49■□□□□ 0.55
UPF3A-211ENST00000618700 FURINP09958 794 aa18.49■□□□□ 0.55
UPF3A-211ENST00000618700 ITPKBP27987 946 aa18.49■□□□□ 0.55
UPF3A-211ENST00000618700 OTX2P32243 289 aa18.49■□□□□ 0.55
UPF3A-211ENST00000618700 ASMTP46597 345 aa18.49■□□□□ 0.55
UPF3A-211ENST00000618700 FOLH1Q04609 750 aa18.49■□□□□ 0.55
UPF3A-211ENST00000618700 SLC13A2Q13183 592 aa18.49■□□□□ 0.55
UPF3A-211ENST00000618700 PTGR1Q14914 329 aa18.49■□□□□ 0.55
UPF3A-211ENST00000618700 NSDHLQ15738 373 aa18.49■□□□□ 0.55
UPF3A-211ENST00000618700 BROXQ5VW32 411 aa18.49■□□□□ 0.55
UPF3A-211ENST00000618700 TMEM198Q66K66 360 aa18.49■□□□□ 0.55
UPF3A-211ENST00000618700 NXNQ6DKJ4 435 aa18.49■□□□□ 0.55
UPF3A-211ENST00000618700 MRGPREQ86SM8 312 aa18.49■□□□□ 0.55
UPF3A-211ENST00000618700 RAB43Q86YS6 212 aa18.49■□□□□ 0.55
UPF3A-211ENST00000618700 CDC26Q8NHZ8 85 aa18.49■□□□□ 0.55
UPF3A-211ENST00000618700 ZNF764Q96H86 408 aaPredicted RBP18.49■□□□□ 0.55
UPF3A-211ENST00000618700 ZZEF1O43149 2961 aa18.48■□□□□ 0.55
UPF3A-211ENST00000618700 NKX2-8O15522 239 aa18.48■□□□□ 0.55
UPF3A-211ENST00000618700 GPR75O95800 540 aa18.48■□□□□ 0.55
UPF3A-211ENST00000618700 SEC24CP53992 1094 aa18.48■□□□□ 0.55
UPF3A-211ENST00000618700 UCNP55089 124 aa18.48■□□□□ 0.55
UPF3A-211ENST00000618700 C21orf58P58505 322 aa18.48■□□□□ 0.55
UPF3A-211ENST00000618700 C2orf80Q0P641 193 aa18.48■□□□□ 0.55
UPF3A-211ENST00000618700 CDC20Q12834 499 aa18.48■□□□□ 0.55
UPF3A-211ENST00000618700 PDE7AQ13946 482 aa18.48■□□□□ 0.55
UPF3A-211ENST00000618700 ATP1A1-AS1Q5TC04 95 aa18.48■□□□□ 0.55
UPF3A-211ENST00000618700 FAAH2Q6GMR7 532 aa18.48■□□□□ 0.55
UPF3A-211ENST00000618700 KIRREL2Q6UWL6 708 aa18.48■□□□□ 0.55
UPF3A-211ENST00000618700 ANKRD37Q7Z713 158 aa18.48■□□□□ 0.55
UPF3A-211ENST00000618700 METTL21AQ8WXB1 218 aa18.48■□□□□ 0.55
UPF3A-211ENST00000618700 BRINP2Q9C0B6 783 aa18.48■□□□□ 0.55
UPF3A-211ENST00000618700 C5AR2Q9P296 337 aa18.48■□□□□ 0.55
UPF3A-211ENST00000618700 A0A0G2JND7 137 aa18.47■□□□□ 0.55
UPF3A-211ENST00000618700 GMNCA6NCL1 334 aa18.47■□□□□ 0.55
UPF3A-211ENST00000618700 K7ENP7 123 aa18.47■□□□□ 0.55
UPF3A-211ENST00000618700 ANKRD28O15084 1053 aa18.47■□□□□ 0.55
UPF3A-211ENST00000618700 TBX19O60806 448 aa18.47■□□□□ 0.55
UPF3A-211ENST00000618700 DRD4P21917 467 aa18.47■□□□□ 0.55
UPF3A-211ENST00000618700 ALDH9A1P49189 494 aa18.47■□□□□ 0.55
UPF3A-211ENST00000618700 ID2Q02363 134 aa18.47■□□□□ 0.55
UPF3A-211ENST00000618700 SERTAD2Q14140 314 aa18.47■□□□□ 0.55
UPF3A-211ENST00000618700 INO80CQ6PI98 192 aaPredicted RBP18.47■□□□□ 0.55
UPF3A-211ENST00000618700 CCDC81Q6ZN84 652 aa18.47■□□□□ 0.55
UPF3A-211ENST00000618700 OR4N5Q8IXE1 308 aa18.47■□□□□ 0.55
UPF3A-211ENST00000618700 RIMKLAQ8IXN7 391 aa18.47■□□□□ 0.55
UPF3A-211ENST00000618700 OR11G2Q8NGC1 345 aa18.47■□□□□ 0.55
UPF3A-211ENST00000618700 C8orf44Q96CB5 159 aa18.47■□□□□ 0.55
UPF3A-211ENST00000618700 IP6K3Q96PC2 410 aa18.47■□□□□ 0.55
UPF3A-211ENST00000618700 REEP4Q9H6H4 257 aa18.47■□□□□ 0.55
UPF3A-211ENST00000618700 TAS2R7Q9NYW3 318 aa18.47■□□□□ 0.55
UPF3A-211ENST00000618700 KLHL14Q9P2G3 628 aa18.47■□□□□ 0.55
UPF3A-211ENST00000618700 C19orf25Q9UFG5 118 aaPredicted RBP18.47■□□□□ 0.55
UPF3A-211ENST00000618700 GPR45Q9Y5Y3 372 aa18.47■□□□□ 0.55
UPF3A-211ENST00000618700 PTPRQQ9UMZ3 2332 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms