RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 PCSK6P29122 969 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 STC1P52823 247 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 CRISP1P54107 249 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 OXA1LQ15070 435 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 RAB6CQ53S08 254 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 ZNF805Q5CZA5 627 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 YIPF7Q8N8F6 280 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 SH3RF2Q8TEC5 729 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 TSEN15Q8WW01 171 aaKnown RBP2.94□□□□□ -1.94
LPP-221ENST00000618621 COG8Q96MW5 612 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 RAB6CQ9H0N0 254 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 FBRSL1Q9HCM7 1045 aaKnown RBP2.94□□□□□ -1.94
LPP-221ENST00000618621 CNOT2Q9NZN8 540 aaKnown RBP2.94□□□□□ -1.94
LPP-221ENST00000618621 SLIT2O94813 1529 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 UGDHO60701 494 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 RNGTTO60942 597 aaKnown RBP2.94□□□□□ -1.94
LPP-221ENST00000618621 SCGNO76038 276 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 CLDN7O95471 211 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 PAHP00439 452 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 HOXB1P14653 301 aaPredicted RBP2.94□□□□□ -1.94
LPP-221ENST00000618621 ZNF3P17036 446 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 EIF4HQ15056 248 aaKnown RBP2.94□□□□□ -1.94
LPP-221ENST00000618621 EXOC3L2Q2M3D2 409 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 SLC36A3Q495N2 470 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 OR4F3Q6IEY1 312 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 RNF111Q6ZNA4 994 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 LGI4Q8N135 537 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 ARMC10Q8N2F6 343 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 PSD4Q8NDX1 1056 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 OR2T33Q8NG76 320 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 BBS10Q8TAM1 723 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 ARMC5Q96C12 935 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 L3HYPDHQ96EM0 354 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 IMP4Q96G21 291 aaKnown RBP2.94□□□□□ -1.94
LPP-221ENST00000618621 REPIN1Q9BWE0 567 aaKnown RBP2.94□□□□□ -1.94
LPP-221ENST00000618621 MED31Q9Y3C7 131 aa2.94□□□□□ -1.94
LPP-221ENST00000618621 DOPEY1Q5JWR5 2465 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 GSRP00390 522 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 F2P00734 622 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 DNTTP04053 509 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 CD2P06729 351 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 GIPP09681 153 aaPredicted RBP2.93□□□□□ -1.94
LPP-221ENST00000618621 EPCAMP16422 314 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 CD68P34810 354 aaPredicted RBP2.93□□□□□ -1.94
LPP-221ENST00000618621 PUM1Q14671 1186 aaKnown RBP eCLIP2.93□□□□□ -1.94
LPP-221ENST00000618621 NXPE4Q6UWF7 544 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 SLC36A4Q6YBV0 504 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 G6PC3Q9BUM1 346 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 HAPLN2Q9GZV7 340 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 GKN1Q9NS71 199 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 NUBP2Q9Y5Y2 271 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 UPK3BL1B0FP48 263 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 UPK3BL2E5RIL1 263 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 ARL6IP5O75915 188 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 PFKLP17858 780 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 AHCYP23526 432 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 GDF5P43026 501 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 DIO3P55073 304 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 NCS1P62166 190 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 RPS13P62277 151 aaKnown RBP2.93□□□□□ -1.94
LPP-221ENST00000618621 TMEM115Q12893 351 aaPredicted RBP2.93□□□□□ -1.94
LPP-221ENST00000618621 SLBPQ14493 270 aaKnown RBP eCLIP2.93□□□□□ -1.94
LPP-221ENST00000618621 SLC30A6Q6NXT4 461 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 ZNF613Q6PF04 617 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 UBE2J2Q8N2K1 259 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 POF1BQ8WVV4 589 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 BPIFA2Q96DR5 249 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 SLC12A9Q9BXP2 914 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 RNF39Q9H2S5 420 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 IFT46Q9NQC8 304 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 TDP1Q9NUW8 608 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 AIG1Q9NVV5 245 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 IL37Q9NZH6 218 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 PPLO60437 1756 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 A0A1B0GVI7 797 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 FAM72CH0Y354 149 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 KIAA0355O15063 1070 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 B4GAT1O43505 415 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 TLL1O43897 1013 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 ZNF623O75123 536 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 SOCS5O75159 536 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 POU3F3P20264 500 aaPredicted RBP2.93□□□□□ -1.94
LPP-221ENST00000618621 PCGF2P35227 344 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 APOFQ13790 326 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 FAM72AQ5TYM5 149 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 FAM72DQ6L9T8 149 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 ENPP6Q6UWR7 440 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 FAM72BQ86X60 149 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 CADM2Q8N3J6 435 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 SLC44A3Q8N4M1 653 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 L3MBTL4Q8NA19 623 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 OR51I1Q9H343 314 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 OSER1Q9NX31 292 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 TAS2R9Q9NYW1 312 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 SERTAD3Q9UJW9 196 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 MGAT4AQ9UM21 535 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 MYH3P11055 1940 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 OR51F1A6NGY5 319 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 AGAP5A6NIR3 686 aa2.93□□□□□ -1.94
LPP-221ENST00000618621 INMT-MINDY4F8WBC2 141 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms