RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 PRAMEF2O60811 474 aa23.2■■□□□ 1.3
PMS1-220ENST00000618056 TUBBP07437 444 aa23.2■■□□□ 1.3
PMS1-220ENST00000618056 NR2F6P10588 404 aa23.2■■□□□ 1.3
PMS1-220ENST00000618056 CPA3P15088 417 aa23.2■■□□□ 1.3
PMS1-220ENST00000618056 H2AFXP16104 143 aaPredicted RBP23.2■■□□□ 1.3
PMS1-220ENST00000618056 TPP2P29144 1249 aaPredicted RBP23.2■■□□□ 1.3
PMS1-220ENST00000618056 CD96P40200 585 aa23.2■■□□□ 1.3
PMS1-220ENST00000618056 ID2Q02363 134 aa23.2■■□□□ 1.3
PMS1-220ENST00000618056 CCNYL1Q8N7R7 359 aa23.2■■□□□ 1.3
PMS1-220ENST00000618056 METTL6Q8TCB7 284 aa23.2■■□□□ 1.3
PMS1-220ENST00000618056 AGAP11Q8TF27 550 aa23.2■■□□□ 1.3
PMS1-220ENST00000618056 C12orf65Q9H3J6 166 aaKnown RBP23.2■■□□□ 1.3
PMS1-220ENST00000618056 WDR41Q9HAD4 459 aa23.2■■□□□ 1.3
PMS1-220ENST00000618056 MID2Q9UJV3 735 aa23.2■■□□□ 1.3
PMS1-220ENST00000618056 MYOCOSA0A1B0GUC4 107 aa23.19■■□□□ 1.3
PMS1-220ENST00000618056 ULK1O75385 1050 aa23.19■■□□□ 1.3
PMS1-220ENST00000618056 GBAP04062 536 aa23.19■■□□□ 1.3
PMS1-220ENST00000618056 GNLYP22749 145 aa23.19■■□□□ 1.3
PMS1-220ENST00000618056 HMOX2P30519 316 aa23.19■■□□□ 1.3
PMS1-220ENST00000618056 STT3AP46977 705 aa23.19■■□□□ 1.3
PMS1-220ENST00000618056 UQCRFS1P47985 274 aa23.19■■□□□ 1.3
PMS1-220ENST00000618056 FOLH1Q04609 750 aa23.19■■□□□ 1.3
PMS1-220ENST00000618056 GALNT1Q10472 559 aaPredicted RBP23.19■■□□□ 1.3
PMS1-220ENST00000618056 CSTF3Q12996 717 aaKnown RBP23.19■■□□□ 1.3
PMS1-220ENST00000618056 TCHHL1Q5QJ38 904 aaPredicted RBP23.19■■□□□ 1.3
PMS1-220ENST00000618056 FRMD7Q6ZUT3 714 aa23.19■■□□□ 1.3
PMS1-220ENST00000618056 COMMD6Q7Z4G1 85 aa23.19■■□□□ 1.3
PMS1-220ENST00000618056 BANPQ8N9N5 519 aa23.19■■□□□ 1.3
PMS1-220ENST00000618056 MDS2Q8NDY4 140 aa23.19■■□□□ 1.3
PMS1-220ENST00000618056 GRHL3Q8TE85 626 aa23.19■■□□□ 1.3
PMS1-220ENST00000618056 APOPT1Q96IL0 206 aa23.19■■□□□ 1.3
PMS1-220ENST00000618056 PLLPQ9Y342 182 aa23.19■■□□□ 1.3
PMS1-220ENST00000618056 C17orf105B2RV13 164 aa23.18■■□□□ 1.3
PMS1-220ENST00000618056 H3BQF6 201 aa23.18■■□□□ 1.3
PMS1-220ENST00000618056 PRKRAO75569 313 aaKnown RBP23.18■■□□□ 1.3
PMS1-220ENST00000618056 AIFM1O95831 613 aa23.18■■□□□ 1.3
PMS1-220ENST00000618056 KLK1P06870 262 aa23.18■■□□□ 1.3
PMS1-220ENST00000618056 COX7A2P14406 83 aa23.18■■□□□ 1.3
PMS1-220ENST00000618056 TRHRP34981 398 aaPredicted RBP23.18■■□□□ 1.3
PMS1-220ENST00000618056 NAGLUP54802 743 aa23.18■■□□□ 1.3
PMS1-220ENST00000618056 TBL3Q12788 808 aaKnown RBP23.18■■□□□ 1.3
PMS1-220ENST00000618056 FAM180AQ6UWF9 173 aa23.18■■□□□ 1.3
PMS1-220ENST00000618056 OR4N5Q8IXE1 308 aa23.18■■□□□ 1.3
PMS1-220ENST00000618056 GBP7Q8N8V2 638 aaPredicted RBP23.18■■□□□ 1.3
PMS1-220ENST00000618056 CCDC63Q8NA47 563 aa23.18■■□□□ 1.3
PMS1-220ENST00000618056 FAR1Q8WVX9 515 aa23.18■■□□□ 1.3
PMS1-220ENST00000618056 HBEGFQ99075 208 aa23.18■■□□□ 1.3
PMS1-220ENST00000618056 TRIM45Q9H8W5 580 aaPredicted RBP23.18■■□□□ 1.3
PMS1-220ENST00000618056 VPS29Q9UBQ0 182 aa23.18■■□□□ 1.3
PMS1-220ENST00000618056 CLEC18AA5D8T8 446 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 CCDC151A5D8V7 595 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 FCHO1O14526 889 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 UBFD1O14562 309 aaKnown RBP23.17■■□□□ 1.3
PMS1-220ENST00000618056 GPR75O95800 540 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 DDAH2O95865 285 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 PLIN5Q00G26 463 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 OR1C1Q15619 314 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 CCNYL2Q5T2Q4 361 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 LIPMQ5VYY2 423 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 FAM219BQ5XKK7 198 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 CLEC18BQ6UXF7 455 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 HORMAD2Q8N7B1 307 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 CLEC18CQ8NCF0 446 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 RBM18Q96H35 190 aaKnown RBP23.17■■□□□ 1.3
PMS1-220ENST00000618056 DGAT2Q96PD7 388 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 SIGLEC12Q96PQ1 595 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 PELOQ9BRX2 385 aaKnown RBP23.17■■□□□ 1.3
PMS1-220ENST00000618056 IQCGQ9H095 443 aaKnown RBP23.17■■□□□ 1.3
PMS1-220ENST00000618056 MID1IP1Q9NPA3 183 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 TEX10Q9NXF1 929 aaPredicted RBP23.17■■□□□ 1.3
PMS1-220ENST00000618056 ANKRD10Q9NXR5 420 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 SPTAN1Q13813 2472 aaKnown RBP23.17■■□□□ 1.3
PMS1-220ENST00000618056 ARHGAP10A1A4S6 786 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 ZFAND5O76080 213 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 TNNI3P19429 210 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 NR6A1Q15406 480 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 ZNF766Q5HY98 468 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 CFAP157Q5JU67 520 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 OR52E8Q6IFG1 317 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 SRRM1Q8IYB3 904 aaKnown RBP23.17■■□□□ 1.3
PMS1-220ENST00000618056 ST13P4Q8IZP2 240 aaPredicted RBP23.17■■□□□ 1.3
PMS1-220ENST00000618056 BCORP1Q8N888 145 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 OR8K3Q8NH51 312 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 SLC2A12Q8TD20 617 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 SCMH1Q96GD3 660 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 TAAR6Q96RI8 345 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 OR8D2Q9GZM6 311 aa23.17■■□□□ 1.3
PMS1-220ENST00000618056 SPTBN1Q01082 2364 aaKnown RBP23.17■■□□□ 1.3
PMS1-220ENST00000618056 SERTM1A2A2V5 107 aa23.16■■□□□ 1.3
PMS1-220ENST00000618056 GUCY1B2O75343 617 aa23.16■■□□□ 1.3
PMS1-220ENST00000618056 NEURL1O76050 574 aa23.16■■□□□ 1.3
PMS1-220ENST00000618056 CBX6O95503 412 aa23.16■■□□□ 1.3
PMS1-220ENST00000618056 ALOX15P16050 662 aaPredicted RBP23.16■■□□□ 1.3
PMS1-220ENST00000618056 MAPK12P53778 367 aa23.16■■□□□ 1.3
PMS1-220ENST00000618056 OC90Q02509 493 aaPredicted RBP23.16■■□□□ 1.3
PMS1-220ENST00000618056 PCLAFQ15004 111 aa23.16■■□□□ 1.3
PMS1-220ENST00000618056 ZNF468Q5VIY5 522 aaPredicted RBP23.16■■□□□ 1.3
PMS1-220ENST00000618056 ZNF324BQ6AW86 544 aaPredicted RBP23.16■■□□□ 1.3
PMS1-220ENST00000618056 HSDL2Q6YN16 418 aa23.16■■□□□ 1.3
PMS1-220ENST00000618056 KCNA7Q96RP8 456 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms