RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 KIR2DS3K7RE56 304 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 GUCY1B2O75343 617 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 BCHEP06276 602 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 C8orf89P0DMQ9 161 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 PAX7P23759 505 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 TSFMP43897 325 aaKnown RBP16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 TGM3Q08188 693 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 KIR2DS5Q14953 304 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 GALNT5Q7Z7M9 940 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 CYP4Z1Q86W10 505 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 PARGQ86W56 976 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 SLC44A2Q8IWA5 706 aaPredicted RBP16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 ZCCHC10Q8TBK6 192 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 UTP15Q8TED0 518 aaKnown RBP16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 SLC38A5Q8WUX1 472 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 ZFPM2Q8WW38 1151 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 CNRIP1Q96F85 164 aaPredicted RBP16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 MAGED4Q96JG8 741 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 SERHL2Q9H4I8 314 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 RUBCNLQ9H714 662 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 REEP1Q9H902 201 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 PDP1Q9P0J1 537 aaPredicted RBP16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 C3orf18Q9UK00 162 aa16.41■□□□□ 0.22
PCDHGC3-205ENST00000617641 PRAMEF25A6NGN4 478 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 PROM1O43490 865 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 SLC35G6P0C7Q6 338 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 IGFBP5P24593 272 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 NUDT1P36639 197 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 POLR2IP36954 125 aaKnown RBP16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 DAPP51397 102 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 ARHGDIAP52565 204 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 EPS8Q12929 822 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 IFI44LQ53G44 452 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 TTC23Q5W5X9 447 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 REEP3Q6NUK4 255 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 ZNF555Q8NEP9 628 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 LZICQ8WZA0 190 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 TM4SF19Q96DZ7 209 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 A4GALTQ9NPC4 353 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 HRASLS2Q9NWW9 162 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 THUMPD1Q9NXG2 353 aaKnown RBP16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 NDUFAF4Q9P032 175 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 CES1P1Q9UKY3 287 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 ORC6Q9Y5N6 252 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 GON4LQ3T8J9 2241 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 LOC105369274A0A096LPK9 316 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 LOC102723532A0A0G2JNH3 316 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 OR5K4A6NMS3 321 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 C2orf74A8MZ97 194 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 HMGN4O00479 90 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 JUNDP17535 347 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 FEN1P39748 380 aaKnown RBP16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 NR1H2P55055 460 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 PPP1CAP62136 330 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 ELOAQ14241 798 aaKnown RBP16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 FRMPD2BQ6IN97 320 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 SLC48A1Q6P1K1 146 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 CCDC116Q8IYX3 515 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 OR4N4Q8N0Y3 316 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 FAM46DQ8NEK8 389 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 SUN3Q8TAQ9 357 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 LRRC61Q9BV99 259 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 PILRAQ9UKJ1 303 aa16.4■□□□□ 0.22
PCDHGC3-205ENST00000617641 KNL1Q8NG31 2342 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 TTC36A6NLP5 189 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 B4DGG1 531 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 C5orf58C9J3I9 102 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 ELK4P28324 431 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 RRM2P31350 389 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 YAP1P46937 504 aaKnown RBP16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 SLC30A8Q8IWU4 369 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 ZFP28Q8NHY6 868 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 TMEM19Q96HH6 336 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 ZCCHC3Q9NUD5 404 aaKnown RBP16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 LYARQ9NX58 379 aaKnown RBP16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 ENTPD4Q9Y227 616 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 MRPS17Q9Y2R5 130 aaKnown RBP16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 TESMINQ9Y4I5 508 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 SMIM31A0A1B0GVY4 71 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 NDUFS2O75306 463 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 IFNA14P01570 189 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 WNT1P04628 370 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 TFPTP0C1Z6 253 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 RAD23AP54725 363 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 IL1RL1Q01638 556 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 HHEXQ03014 270 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 MAPK11Q15759 364 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 GPR19Q15760 415 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 LEXMQ3ZCV2 418 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 C8orf59Q8N0T1 100 aaPredicted RBP16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 OR5D16Q8NGK9 328 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 ZDHHC1Q8WTX9 485 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 SLC35G5Q96KT7 338 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 EPB41L1Q9H4G0 881 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 FBXL21Q9UKT6 434 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 ENTPD2Q9Y5L3 495 aa16.39■□□□□ 0.21
PCDHGC3-205ENST00000617641 LOC100130705A0A1B0GUX0 176 aa16.38■□□□□ 0.21
PCDHGC3-205ENST00000617641 DPM1O60762 260 aa16.38■□□□□ 0.21
PCDHGC3-205ENST00000617641 C9P02748 559 aa16.38■□□□□ 0.21
PCDHGC3-205ENST00000617641 MAOBP27338 520 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms