RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 TMEM150AQ86TG1 271 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 FAM46DQ8NEK8 389 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR4E2Q8NGC2 313 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZNF675Q8TD23 568 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 FGF13Q92913 245 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 PHF21AQ96BD5 680 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 SH3YL1Q96HL8 342 aaPredicted RBP5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 LRR1Q96L50 414 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 SORBS1Q9BX66 1292 aaKnown RBP5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 C11orf49Q9H6J7 331 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 TBC1D17Q9HA65 648 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 COMMD3Q9UBI1 195 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 PCM1Q15154 2024 aa5.38□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZNF860A6NHJ4 632 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 UPK1AO00322 258 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 GAPDHSO14556 408 aaPredicted RBP5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR10H2O60403 315 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 MATN1P21941 496 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 GADD45AP24522 165 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 CMPK1P30085 196 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 PTGER1P34995 402 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 LBX1P52954 281 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 LTBP1Q14766 1721 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 LEXMQ3ZCV2 418 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZNF311Q5JNZ3 666 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 SLC7A13Q8TCU3 470 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 SLC22A18Q96BI1 424 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 MCHR1Q99705 422 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 CNPPD1Q9BV87 410 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 RAB11FIP5Q9BXF6 653 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 KCNK12Q9HB15 430 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 SERHLQ9NQF3 203 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 MS4A12Q9NXJ0 267 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 RBMX2Q9Y388 322 aaKnown RBP5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 GMEB1Q9Y692 573 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 TRBV5-3A0A0A0MS03 114 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 ANHXE9PGG2 379 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 NDUFS4O43181 175 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 SEC14L2O76054 403 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 ARAFP10398 606 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 CKMT1AP12532 417 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 GSTM3P21266 225 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 FSHRP23945 695 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 IRS1P35568 1242 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 ERVK-21P61565 698 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZNF234Q14588 700 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 SPCS2Q15005 226 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 DUSP7Q16829 419 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 SYT6Q5T7P8 510 aaPredicted RBP5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 TUBA3EQ6PEY2 450 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 SMARCD3Q6STE5 483 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 IKBIPQ70UQ0 350 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 ADIPOR2Q86V24 386 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 IGFN1Q86VF2 1251 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 UBE2J2Q8N2K1 259 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 PIGXQ8TBF5 258 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 CAPSLQ8WWF8 208 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR51V1Q9H2C8 321 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 MRPS30Q9NP92 439 aaKnown RBP5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 NDUFAF4Q9P032 175 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 SEC14L4Q9UDX3 406 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 ENPP5Q9UJA9 477 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 TRPM6Q9BX84 2022 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 KIAA1217Q5T5P2 1943 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 INTS1Q8N201 2190 aaKnown RBP5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 CPSF4LA6NMK7 179 aaKnown RBP5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 FAM170BA6NMN3 283 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 RNASET2O00584 256 aaKnown RBP5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 PCDH17O14917 1159 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 PGRMC2O15173 223 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 FRS3O43559 492 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 HCN1O60741 890 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 ETHE1O95571 254 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 CCR2P41597 374 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 ST3GAL3Q11203 375 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 RAB32Q13637 225 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 GPNMBQ14956 572 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 NDUFAF5Q5TEU4 345 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 KIAA1161Q6NSJ0 714 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 Q6ZNB5 142 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 ALDH16A1Q8IZ83 802 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 FLCNQ8NFG4 579 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR52E4Q8NGH9 312 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 TMCO6Q96DC7 493 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 CNDP2Q96KP4 475 aaKnown RBP5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 VN1R3Q9BXE9 311 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 ZBP1Q9H171 429 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 SRMSQ9H3Y6 488 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 TIGARQ9NQ88 270 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 SLC35C2Q9NQQ7 365 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 AP1M2Q9Y6Q5 423 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 ARFGEF1Q9Y6D6 1849 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 TRIP11Q15643 1979 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 SIPA1L1O43166 1804 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 TAF1LQ8IZX4 1826 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 OR12D1P0DN82 309 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 JUNBP17275 347 aaPredicted RBP5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 IL1RNP18510 177 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 UQCRC2P22695 453 aa5.37□□□□□ -1.55
SYNCRIP-204ENST00000616122 DAPP51397 102 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms