RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 RBM4Q9BWF3 364 aaKnown RBP8.42□□□□□ -1.06
VPS11-206ENST00000614944 SPATA9Q9BWV2 254 aa8.42□□□□□ -1.06
VPS11-206ENST00000614944 SPNS1Q9H2V7 528 aa8.42□□□□□ -1.06
VPS11-206ENST00000614944 TM9SF3Q9HD45 589 aa8.42□□□□□ -1.06
VPS11-206ENST00000614944 CUEDC1Q9NWM3 386 aaPredicted RBP8.42□□□□□ -1.06
VPS11-206ENST00000614944 USP36Q9P275 1121 aaKnown RBP8.42□□□□□ -1.06
VPS11-206ENST00000614944 WARS2Q9UGM6 360 aaKnown RBP8.42□□□□□ -1.06
VPS11-206ENST00000614944 CRLS1Q9UJA2 301 aa8.42□□□□□ -1.06
VPS11-206ENST00000614944 GPR34Q9UPC5 381 aa8.42□□□□□ -1.06
VPS11-206ENST00000614944 MGAT4BQ9UQ53 548 aa8.42□□□□□ -1.06
VPS11-206ENST00000614944 KPNA3O00505 521 aaPredicted RBP8.41□□□□□ -1.06
VPS11-206ENST00000614944 STX16O14662 325 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 KERAO60938 352 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 OR56A5P0C7T3 313 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 FGF3P11487 239 aaPredicted RBP8.41□□□□□ -1.06
VPS11-206ENST00000614944 ATP5F1P24539 256 aaPredicted RBP8.41□□□□□ -1.06
VPS11-206ENST00000614944 TAS2R38P59533 333 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 SNRPD2P62316 118 aaKnown RBP8.41□□□□□ -1.06
VPS11-206ENST00000614944 ERVK-25P63136 954 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 PUM1Q14671 1186 aaKnown RBP eCLIP8.41□□□□□ -1.06
VPS11-206ENST00000614944 AP5B1Q2VPB7 878 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 TTLL9Q3SXZ7 439 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 KLHL12Q53G59 568 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 LIPMQ5VYY2 423 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 TMEM207Q6UWW9 146 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 FAM151BQ6UXP7 276 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 RNF165Q6ZSG1 346 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 SYT13Q7L8C5 426 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 SLC16A13Q7RTY0 426 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 KRT78Q8N1N4 520 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 PLD6Q8N2A8 252 aaKnown RBP8.41□□□□□ -1.06
VPS11-206ENST00000614944 FBXO15Q8NCQ5 510 aaPredicted RBP8.41□□□□□ -1.06
VPS11-206ENST00000614944 ZNF248Q8NDW4 579 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 OR6M1Q8NGM8 313 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 CXorf40AQ8TE69 158 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 DLG3Q92796 817 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 GLYATL1Q969I3 302 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 RILPQ96NA2 401 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 SMIM14Q96QK8 99 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 PFDN5Q99471 154 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 SLC25A23Q9BV35 468 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 ERVK-6Q9BXR3 956 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 REXO4Q9GZR2 422 aaKnown RBP8.41□□□□□ -1.06
VPS11-206ENST00000614944 SGK2Q9HBY8 427 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 ERVK-18Q9QC07 812 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 NDUFAF1Q9Y375 327 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 NAALAD2Q9Y3Q0 740 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 PRSS51A0A1B0GVH4 220 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 AKR7A2O43488 359 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 FTH1P02794 183 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 JUNP05412 331 aaKnown RBP8.41□□□□□ -1.06
VPS11-206ENST00000614944 CKMT1AP12532 417 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 C6P13671 934 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 HLA-EP13747 358 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 ATP1B2P14415 290 aaPredicted RBP8.41□□□□□ -1.06
VPS11-206ENST00000614944 SLC2A4P14672 509 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 JUNBP17275 347 aaPredicted RBP8.41□□□□□ -1.06
VPS11-206ENST00000614944 NDUFB7P17568 137 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 NUP62P37198 522 aaPredicted RBP8.41□□□□□ -1.06
VPS11-206ENST00000614944 RPS9P46781 194 aaKnown RBP8.41□□□□□ -1.06
VPS11-206ENST00000614944 ALDH9A1P49189 494 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 PRLHRP49683 370 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 RPS21P63220 83 aaKnown RBP8.41□□□□□ -1.06
VPS11-206ENST00000614944 ZP2Q05996 745 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 CNTN1Q12860 1018 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 ART3Q13508 389 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 AQP6Q13520 282 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 SEC23BQ15437 767 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 KIF19Q2TAC6 998 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 ATP13A5Q4VNC0 1218 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 PPM1JQ5JR12 505 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 ISCA2Q86U28 154 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 PHYKPLQ8IUZ5 450 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 EFCAB3Q8N7B9 438 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 TMEM102Q8N9M5 508 aaPredicted RBP8.41□□□□□ -1.06
VPS11-206ENST00000614944 UBTD2Q8WUN7 234 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 NXNL1Q96CM4 212 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 SCARF2Q96GP6 870 aaPredicted RBP8.41□□□□□ -1.06
VPS11-206ENST00000614944 ACOX2Q99424 681 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 WDR77Q9BQA1 342 aaPredicted RBP8.41□□□□□ -1.06
VPS11-206ENST00000614944 MED18Q9BUE0 208 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 TEX101Q9BY14 249 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 ZCCHC4Q9H5U6 513 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 BPIFA1Q9NP55 256 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 SLC23A1Q9UHI7 598 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 ABCG2Q9UNQ0 655 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 E7ENX8 843 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 SLC30A4O14863 429 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 SIGLEC6O43699 453 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 LYPLA1O75608 230 aaPredicted RBP8.41□□□□□ -1.06
VPS11-206ENST00000614944 KLHL18O94889 574 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 RECKO95980 971 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 NR2C1P13056 603 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 HOXB2P14652 356 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 ZNF8P17098 575 aaPredicted RBP8.41□□□□□ -1.06
VPS11-206ENST00000614944 DGKAP23743 735 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 PSMD8P48556 350 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 B4GALNT1Q00973 533 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 GRK1Q15835 563 aa8.41□□□□□ -1.06
VPS11-206ENST00000614944 RFX4Q33E94 735 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms