RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 ZNF730Q6ZMV8 503 aa11.25□□□□□ -0.61
CDH5-208ENST00000614547 BBS4Q96RK4 519 aa11.25□□□□□ -0.61
CDH5-208ENST00000614547 EPYCQ99645 322 aa11.25□□□□□ -0.61
CDH5-208ENST00000614547 RNF208Q9H0X6 261 aa11.25□□□□□ -0.61
CDH5-208ENST00000614547 MTMR11A4FU01 709 aa11.25□□□□□ -0.61
CDH5-208ENST00000614547 RFXAPO00287 272 aa11.25□□□□□ -0.61
CDH5-208ENST00000614547 SYPP08247 313 aa11.25□□□□□ -0.61
CDH5-208ENST00000614547 ATP12AP54707 1039 aa11.25□□□□□ -0.61
CDH5-208ENST00000614547 BICRALQ6AI39 1079 aa11.25□□□□□ -0.61
CDH5-208ENST00000614547 C11orf88Q6PI97 169 aa11.25□□□□□ -0.61
CDH5-208ENST00000614547 Q6ZVL8 140 aa11.25□□□□□ -0.61
CDH5-208ENST00000614547 CCDC190Q86UF4 302 aa11.25□□□□□ -0.61
CDH5-208ENST00000614547 DPF3Q92784 378 aa11.25□□□□□ -0.61
CDH5-208ENST00000614547 SPATA9Q9BWV2 254 aa11.25□□□□□ -0.61
CDH5-208ENST00000614547 ELAC1Q9H777 363 aaKnown RBP11.25□□□□□ -0.61
CDH5-208ENST00000614547 EVA1BQ9NVM1 165 aa11.25□□□□□ -0.61
CDH5-208ENST00000614547 COL11A1P12107 1806 aaPredicted RBP11.25□□□□□ -0.61
CDH5-208ENST00000614547 WDR87Q6ZQQ6 2873 aa11.25□□□□□ -0.61
CDH5-208ENST00000614547 WASH4PA8MWX3 477 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 KPNA3O00505 521 aaPredicted RBP11.24□□□□□ -0.61
CDH5-208ENST00000614547 HRGP04196 525 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 CSF3P09919 207 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 CTGFP29279 349 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 KCNJ10P78508 379 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 PURAQ00577 322 aaKnown RBP11.24□□□□□ -0.61
CDH5-208ENST00000614547 P2RY14Q15391 338 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 TXNDC8Q6A555 127 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 ZNF613Q6PF04 617 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 LRRC70Q7Z2Q7 622 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 IZUMO1Q8IYV9 350 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 DOK4Q8TEW6 326 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 MAGEB10Q96LZ2 347 aaPredicted RBP11.24□□□□□ -0.61
CDH5-208ENST00000614547 SLC38A2Q96QD8 506 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 WRAP53Q9BUR4 548 aaKnown RBP11.24□□□□□ -0.61
CDH5-208ENST00000614547 SAP130Q9H0E3 1048 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 STARD7Q9NQZ5 370 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 TXNL4BQ9NX01 149 aaKnown RBP11.24□□□□□ -0.61
CDH5-208ENST00000614547 ZDHHC3Q9NYG2 299 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 FNIP2Q9P278 1114 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 ARID2Q68CP9 1835 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 URB1O60287 2271 aaKnown RBP11.24□□□□□ -0.61
CDH5-208ENST00000614547 B4GALT3O60512 393 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 ARF5P84085 180 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 GPR50Q13585 617 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 EFR3AQ14156 821 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 KIAA0040Q15053 153 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 FCN2Q15485 313 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 XKR4Q5GH76 650 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 SAXO2Q658L1 398 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 LILRA3Q8N6C8 439 aaPredicted RBP11.24□□□□□ -0.61
CDH5-208ENST00000614547 ZNF433Q8N7K0 673 aaPredicted RBP11.24□□□□□ -0.61
CDH5-208ENST00000614547 OR10H4Q8NGA5 316 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 CEP76Q8TAP6 659 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 CHAC2Q8WUX2 184 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 HMGB4Q8WW32 186 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 MED30Q96HR3 178 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 TEFMQ96QE5 360 aaKnown RBP11.24□□□□□ -0.61
CDH5-208ENST00000614547 HTATIP2Q9BUP3 242 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 NTMT1Q9BV86 223 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 OSGEPL1Q9H4B0 414 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 CKAP5Q14008 2032 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 SCAMP2O15127 329 aaKnown RBP11.24□□□□□ -0.61
CDH5-208ENST00000614547 ZNF780AO75290 641 aaPredicted RBP11.24□□□□□ -0.61
CDH5-208ENST00000614547 WISP3O95389 354 aaPredicted RBP11.24□□□□□ -0.61
CDH5-208ENST00000614547 TP53P04637 393 aaPredicted RBP11.24□□□□□ -0.61
CDH5-208ENST00000614547 RFX2P48378 723 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 VSX2P58304 361 aaPredicted RBP11.24□□□□□ -0.61
CDH5-208ENST00000614547 SSX1Q16384 188 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 DUSP7Q16829 419 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 CCSMST1Q4G0I0 132 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 AFMIDQ63HM1 303 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 XKRXQ6PP77 449 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 LINC00299Q6ZSB3 139 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 TRIM46Q7Z4K8 759 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 COMMD7Q86VX2 200 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 KLBQ86Z14 1044 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 MMP21Q8N119 569 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 GALNT11Q8NCW6 608 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 POP5Q969H6 163 aaKnown RBP11.24□□□□□ -0.61
CDH5-208ENST00000614547 OPALINQ96PE5 141 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 TRIB3Q96RU7 358 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 KLK4Q9Y5K2 254 aa11.24□□□□□ -0.61
CDH5-208ENST00000614547 MIA3Q5JRA6 1907 aa11.23□□□□□ -0.61
CDH5-208ENST00000614547 NPIPB15A6NHN6 443 aaPredicted RBP11.23□□□□□ -0.61
CDH5-208ENST00000614547 PGRMC2O15173 223 aa11.23□□□□□ -0.61
CDH5-208ENST00000614547 PDPK1O15530 556 aa11.23□□□□□ -0.61
CDH5-208ENST00000614547 IL3P08700 152 aa11.23□□□□□ -0.61
CDH5-208ENST00000614547 NOS3P29474 1203 aa11.23□□□□□ -0.61
CDH5-208ENST00000614547 BLVRAP53004 296 aa11.23□□□□□ -0.61
CDH5-208ENST00000614547 PSPHP78330 225 aa11.23□□□□□ -0.61
CDH5-208ENST00000614547 GRB14Q14449 540 aa11.23□□□□□ -0.61
CDH5-208ENST00000614547 INSL4Q14641 139 aa11.23□□□□□ -0.61
CDH5-208ENST00000614547 OR51G2Q8NGK0 314 aa11.23□□□□□ -0.61
CDH5-208ENST00000614547 IL17FQ96PD4 163 aa11.23□□□□□ -0.61
CDH5-208ENST00000614547 GAL3ST1Q99999 423 aa11.23□□□□□ -0.61
CDH5-208ENST00000614547 NARFLQ9H6Q4 476 aa11.23□□□□□ -0.61
CDH5-208ENST00000614547 NAALAD2Q9Y3Q0 740 aa11.23□□□□□ -0.61
CDH5-208ENST00000614547 ENPP4Q9Y6X5 453 aa11.23□□□□□ -0.61
CDH5-208ENST00000614547 CCDC88CQ9P219 2028 aa11.23□□□□□ -0.61
CDH5-208ENST00000614547 TRIM64BA6NI03 449 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms