RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 DNAL1Q4LDG9 190 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 PHF19Q5T6S3 580 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 CPTPQ5TA50 214 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 NDUFAF5Q5TEU4 345 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 PRSS41Q7RTY9 318 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 VASH2Q86V25 355 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 GPR180Q86V85 440 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 BPHLQ86WA6 291 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-212ENST00000613856 GPR135Q8IZ08 494 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 OR7A2PQ8NGA2 310 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 DNAJB8Q8NHS0 232 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 ADAMTS18Q8TE60 1221 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 GFM2Q969S9 779 aaKnown RBP10.79□□□□□ -0.68
SLIRP-212ENST00000613856 VPS33AQ96AX1 596 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 PPCDCQ96CD2 204 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 CCNL2Q96S94 520 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-212ENST00000613856 NPAS2Q99743 824 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 BTBD10Q9BSF8 475 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 SPRTNQ9H040 489 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-212ENST00000613856 RMND5AQ9H871 391 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 MIEF1Q9NQG6 463 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 IRAK4Q9NWZ3 460 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 TEX10Q9NXF1 929 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-212ENST00000613856 TAS2R7Q9NYW3 318 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 TAS2R1Q9NYW7 299 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 KCMF1Q9P0J7 381 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 SERTAD3Q9UJW9 196 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 DAPP1Q9UN19 280 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 SRPK3Q9UPE1 567 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 MAN2B2Q9Y2E5 1009 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 NAALAD2Q9Y3Q0 740 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 PCDHGA8Q9Y5G5 932 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 PCDHA9Q9Y5H5 950 aa10.79□□□□□ -0.68
SLIRP-212ENST00000613856 SEC16AO15027 2179 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 A0A1W2PR48 441 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 C1orf226A1L170 272 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 H0YIG0 161 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 FXYD1O00168 92 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 RNASET2O00584 256 aaKnown RBP10.78□□□□□ -0.68
SLIRP-212ENST00000613856 AIM2O14862 343 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 PROM1O43490 865 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 FOXS1O43638 330 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 SCN2BO60939 215 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 DNAJC8O75937 253 aaPredicted RBP10.78□□□□□ -0.68
SLIRP-212ENST00000613856 MED26O95402 600 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 AIFM1O95831 613 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 B3GALT4O96024 378 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 NR2F6P10588 404 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 ITGAXP20702 1163 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 CSTF2P33240 577 aaKnown RBP eCLIP10.78□□□□□ -0.68
SLIRP-212ENST00000613856 BUD31P41223 144 aaPredicted RBP10.78□□□□□ -0.68
SLIRP-212ENST00000613856 ARSFP54793 590 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 LIM2P55344 173 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 WNT3P56703 355 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 RAB38P57729 211 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 PHC1P78364 1004 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 MXRA7P84157 204 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 MC1RQ01726 317 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 ART3Q13508 389 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 RUNX2Q13950 521 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 C16orf72Q14CZ0 275 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 TRMT5Q32P41 509 aaKnown RBP10.78□□□□□ -0.68
SLIRP-212ENST00000613856 ZNF385BQ569K4 471 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 ANXA8L1Q5VT79 327 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 C8orf82Q6P1X6 216 aaPredicted RBP10.78□□□□□ -0.68
SLIRP-212ENST00000613856 C16orf89Q6UX73 402 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 RINLQ6ZS11 566 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 RIPOR1Q6ZS17 1223 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 TICAM1Q8IUC6 712 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 PGAM4Q8N0Y7 254 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 CA13Q8N1Q1 262 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 EFCAB3Q8N7B9 438 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 FAM47BQ8NA70 645 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 AGBL5Q8NDL9 886 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 RCBTB1Q8NDN9 531 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 FBXO27Q8NI29 283 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 GTF2H4Q92759 462 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 KLHL29Q96CT2 875 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 OR52E6Q96RD3 313 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 MAPKAP1Q9BPZ7 522 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 DUSP26Q9BV47 211 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 CUTCQ9NTM9 273 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 GID8Q9NWU2 228 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 MAP10Q9P2G4 905 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 BTNL2Q9UIR0 455 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 ATG4BQ9Y4P1 393 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 SPACA6W5XKT8 324 aa10.78□□□□□ -0.68
SLIRP-212ENST00000613856 NUP214P35658 2090 aaPredicted RBP10.77□□□□□ -0.69
SLIRP-212ENST00000613856 A0A0A6YYC8 382 aaPredicted RBP10.77□□□□□ -0.69
SLIRP-212ENST00000613856 C15orf38-AP3S2A0A0A6YYH1 394 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 BLACEA4D250 179 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 I3L1I5 382 aaPredicted RBP10.77□□□□□ -0.69
SLIRP-212ENST00000613856 DSCR3O14972 297 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 GYG2O15488 501 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 RDH16O75452 317 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 LAMP1P11279 417 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 FGF5P12034 268 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 HOXB9P17482 250 aaPredicted RBP10.77□□□□□ -0.69
SLIRP-212ENST00000613856 SLC5A2P31639 672 aa10.77□□□□□ -0.69
SLIRP-212ENST00000613856 FRKP42685 505 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms