RNA–Protein interactions for RNA: ENST00000612980.4

RDM1-215, Transcript of RAD52 motif containing 1, human

TSL 1 (best) BASIC

Gene RDM1, Length 501 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDM1-215	ENST00000612980	GALNT18	Q6P9A2	607 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	TMEM220	Q6QAJ8	160 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	ENPP6	Q6UWR7	440 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980		Q6ZVU0	165 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	CBLL1	Q75N03	491 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	ZNF765	Q7L2R6	523 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	PIWIL3	Q7Z3Z3	882 aa	Known RBP	4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	THAP5	Q7Z6K1	395 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	GTF2IRD2	Q86UP8	949 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	GPR180	Q86V85	440 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	FJX1	Q86VR8	437 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	THOC6	Q86W42	341 aa	Known RBP	4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	DCP2	Q8IU60	420 aa	Known RBP	4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	ZDHHC13	Q8IUH4	622 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	MMAA	Q8IVH4	418 aa	Known RBP	4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	LRRC56	Q8IYG6	542 aa	Predicted RBP	4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	SLC22A15	Q8IZD6	547 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	C10orf111	Q8N326	155 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	TMEM132C	Q8N3T6	1108 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	CISD2	Q8N5K1	135 aa	Known RBP	4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	FAM86B1	Q8N7N1	296 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	RASGEF1A	Q8N9B8	481 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	TMIE	Q8NEW7	156 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	OR14C36	Q8NHC7	312 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	GOT1L1	Q8NHS2	421 aa	Predicted RBP	4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	ZNF420	Q8TAQ5	688 aa	Predicted RBP	4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	WFIKKN2	Q8TEU8	576 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	ITLN2	Q8WWU7	325 aa	Predicted RBP	4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	ATL1	Q8WXF7	558 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	HDAC2	Q92769	488 aa	Known RBP	4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	GLMN	Q92990	594 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	GLYATL1	Q969I3	302 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	FAM120B	Q96EK7	910 aa	Known RBP	4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	NRBF2	Q96F24	287 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	KLHDC7B	Q96G42	594 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	REXO5	Q96IC2	774 aa	Known RBP	4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	EGLN2	Q96KS0	407 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	LINC00615	Q96LM1	132 aa	Predicted RBP	4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	MUS81	Q96NY9	551 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	OR4K3	Q96R72	315 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	GFM1	Q96RP9	751 aa	Known RBP	4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	PKP4	Q99569	1192 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	INPP5K	Q9BT40	448 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	RIOK2	Q9BVS4	552 aa	Known RBP	4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	RSPH9	Q9H1X1	276 aa	Predicted RBP	4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	ELOVL6	Q9H5J4	265 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	PIF1	Q9H611	641 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	ZDHHC6	Q9H6R6	413 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	PCDH12	Q9NPG4	1184 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	IL1RAP	Q9NPH3	570 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	TIMMDC1	Q9NPL8	285 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	DDX18	Q9NVP1	670 aa	Known RBP	4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	GULP1	Q9UBP9	304 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	VPS29	Q9UBQ0	182 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	IL36A	Q9UHA7	158 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	ATP6V1H	Q9UI12	483 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	BTNL2	Q9UIR0	455 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	OSGIN2	Q9Y236	505 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	RUVBL1	Q9Y265	456 aa	Known RBP	4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	PCDHGB1	Q9Y5G3	927 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	POLE	Q07864	2286 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	UNC13C	Q8NB66	2214 aa		4.53	□□□□□ -1.68
RDM1-215	ENST00000612980	CUBN	O60494	3623 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	LOC100130705	A0A1B0GUX0	176 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	ARHGEF33	A8MVX0	844 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	EVPLL	A8MZ36	301 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	TMEM229A	B2RXF0	380 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	CLIC1	O00299	241 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	CLGN	O14967	610 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	GCM2	O75603	506 aa	Predicted RBP	4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	SEC14L2	O76054	403 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	C1orf105	O95561	183 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	CPNE6	O95741	557 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	CLIC3	O95833	236 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	CST1	P01037	141 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	ALB	P02768	609 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	ETS2	P15036	469 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	NPPB	P16860	134 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	NELFE	P18615	380 aa	Known RBP	4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	TCN2	P20062	427 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	CRHBP	P24387	322 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	RPL10	P27635	214 aa	Known RBP	4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	CD82	P27701	267 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	DCK	P27707	260 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	CALR	P27797	417 aa	Known RBP	4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	GSTM2	P28161	218 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	ACADL	P28330	430 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	KDELR2	P33947	212 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	SHMT2	P34897	504 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	POLR2I	P36954	125 aa	Known RBP	4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	RBMX	P38159	391 aa	Known RBP	4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	ARL1	P40616	181 aa	Predicted RBP	4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	ETV3	P41162	512 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	CDKN2C	P42773	168 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	KIR3DL1	P43629	444 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	CTSC	P53634	463 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	PNLIPRP1	P54315	467 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	EMP3	P54852	163 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	NUP107	P57740	925 aa		4.52	□□□□□ -1.69
RDM1-215	ENST00000612980	CXCR4	P61073	352 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms