RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 CA5BQ9Y2D0 317 aa13.38□□□□□ -0.27
PCDHGA3-202ENST00000612467 TRBV23OR9-2A0A075B6M9 112 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 ANHXE9PGG2 379 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 ATP6V1G1O75348 118 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 BMP4P12644 408 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 UQCRC2P22695 453 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 GADD45AP24522 165 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 CTSKP43235 329 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 CXCR4P61073 352 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 CSNK1G2P78368 415 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 CD300CQ08708 224 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 FADDQ13158 208 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 CRB2Q5IJ48 1285 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 TMEM31Q5JXX7 168 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 ADAMTSL4Q6UY14 1074 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 CLIP4Q8N3C7 705 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 DNAJC22Q8N4W6 341 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 RHOXF1Q8NHV9 184 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 LGALS12Q96DT0 336 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 TMEM106CQ9BVX2 250 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 FAIMQ9NVQ4 179 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 MS4A12Q9NXJ0 267 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 PSORS1C1Q9UIG5 152 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 DUSP12Q9UNI6 340 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 ANGPT4Q9Y264 503 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 HSPE1-MOB4S4R3N1 261 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 ATG2AQ2TAZ0 1938 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 LOC100506127A0A0U1RQW1 187 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 C5orf67F2Z3F1 127 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 M0R3H8 397 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 HMGN4O00479 90 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 NDUFS4O43181 175 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 ERAL1O75616 437 aaKnown RBP13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 CCR8P51685 355 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 UBE3AQ05086 875 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 EIF4HQ15056 248 aaKnown RBP13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 GPR19Q15760 415 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 ZNF630Q2M218 657 aaPredicted RBP13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 C11orf74Q86VG3 221 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 XAGE5Q8WWM1 108 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 GEMIN6Q8WXD5 167 aaKnown RBP13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 MKRN2Q9H000 416 aaKnown RBP13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 WDR26Q9H7D7 661 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 SPHK1Q9NYA1 384 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 FAM32AQ9Y421 112 aaKnown RBP13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 ENPP4Q9Y6X5 453 aa13.37□□□□□ -0.27
PCDHGA3-202ENST00000612467 C5orf58C9J3I9 102 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 CAPN5O15484 640 aaPredicted RBP13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 KRT75O95678 551 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 OCM2P0CE71 109 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 OCMP0CE72 109 aaPredicted RBP13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 IMPDH2P12268 514 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 CNR2P34972 360 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 REEP3Q6NUK4 255 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 ADCK1Q86TW2 530 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 TAGAPQ8N103 731 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 FBXL6Q8N531 539 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 OR8K5Q8NH50 307 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 DYNC2LI1Q8TCX1 351 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 DOK4Q8TEW6 326 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 FGF14Q92915 247 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 COL21A1Q96P44 957 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 DPH7Q9BTV6 452 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 HDAC8Q9BY41 377 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 OR51E2Q9H255 320 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 SCHIP1Q9P0W5 487 aaPredicted RBP13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 YBX2Q9Y2T7 364 aaKnown RBP13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 GMEB1Q9Y692 573 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 TMEM247A6NEH6 219 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 EPOPA6NHQ4 379 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 SOBPA7XYQ1 873 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 PGRMC2O15173 223 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 CCNB2O95067 398 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 IFNW1P05000 195 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 HOXB6P17509 224 aaKnown RBP13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 GABRB1P18505 474 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 CHMP24386 653 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 RBBP4Q09028 425 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 ST3GAL4Q11206 333 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 PIN1Q13526 163 aaPredicted RBP13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 SAXO2Q658L1 398 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 CCDC80Q76M96 950 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 PAGE2Q7Z2X7 111 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 ZNF605Q86T29 641 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 TRUB1Q8WWH5 349 aaKnown RBP13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 UBE2E3Q969T4 207 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 OR5M11Q96RB7 305 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 THSD1Q9NS62 852 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 IMPAD1Q9NX62 359 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 TRPC4Q9UBN4 977 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 GPSM3Q9Y4H4 160 aa13.36□□□□□ -0.27
PCDHGA3-202ENST00000612467 PDZK1P1A8MUH7 402 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 EFCAB9A8MZ26 197 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 SLC31A1O15431 190 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 DNAJB5O75953 348 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 EML2O95834 649 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 ERGP11308 486 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 PCSK2P16519 638 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 PTNP21246 168 aa13.35□□□□□ -0.27
PCDHGA3-202ENST00000612467 BCL6P41182 706 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms