RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 MED27Q6P2C8 311 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 ISCA2Q86U28 154 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 CTAGE3PQ8IX95 158 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 LAS2Q8IYD9 372 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 FAM109AQ8N4B1 249 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 RNF175Q8N4F7 328 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 OR7G3Q8NG95 312 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 STAG3L4Q8TBR4 150 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 UBE2E3Q969T4 207 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 CMTM7Q96FZ5 175 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 RBM18Q96H35 190 aaKnown RBP12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 ZNF559Q9BR84 538 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 ERP44Q9BS26 406 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 TTYH2Q9BSA4 534 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 SORBS1Q9BX66 1292 aaKnown RBP12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 OR51B5Q9H339 312 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 ALG9Q9H6U8 611 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 LDAHQ9H6V9 325 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 ALKBH4Q9NXW9 302 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 WHRNQ9P202 907 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 ACAD8Q9UKU7 415 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 FIGNL2A6NMB9 653 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 AQP7O14520 342 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 EIF3HO15372 352 aaKnown RBP eCLIP12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 FGF17O60258 216 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 KLK8O60259 260 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 SUSD5O60279 629 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 FAM155BO75949 473 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 SCELO95171 688 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 C1QAP02745 245 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 GLI4P10075 376 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 COX7A2P14406 83 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 PIGAP37287 484 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 SSR2P43308 183 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 STT3AP46977 705 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 ZFP36L2P47974 494 aaKnown RBP12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 GPX6P59796 221 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 IGLV3-21P80748 117 aaPredicted RBP12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 DLG1Q12959 904 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 CALCOCO2Q13137 446 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 BIKQ13323 160 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 HYAL4Q2M3T9 481 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 GRTP1Q5TC63 336 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 KHDRBS2Q5VWX1 349 aaKnown RBP12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 CES4AQ5XG92 561 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 SLC22A10Q63ZE4 541 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 B3GNT6Q6ZMB0 384 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 DGAT2L6Q6ZPD8 337 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 RAPH1Q70E73 1250 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 LRRC70Q7Z2Q7 622 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 C7orf57Q8NEG2 295 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 DOK4Q8TEW6 326 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 DGAT2Q96PD7 388 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 RPF2Q9H7B2 306 aaKnown RBP12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 OPTCQ9UBM4 332 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 RNF14Q9UBS8 474 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 ATG4BQ9Y4P1 393 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 FAM215AQ9Y5M1 114 aa12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 SETD2Q9BYW2 2564 aaPredicted RBP12.36□□□□□ -0.43
POLR2J3-219ENST00000608621 A0A0G2JNJ9 132 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 FAM187AA6NFU0 413 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 SUPT3HB4E1H0 165 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 K7EPI3 171 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 UBXN8O00124 270 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 HRKO00198 91 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 SUPT3HO75486 399 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 IGKV3-11P04433 115 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 PCDH1Q08174 1060 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 DDX39BQ13838 428 aaKnown RBP12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 ZNF791Q3KP31 576 aaPredicted RBP12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 WLSQ5T9L3 541 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 LYPD8Q6UX82 237 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 CMC1Q7Z7K0 106 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 GPR180Q86V85 440 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 LIX1LQ8IVB5 337 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 C9orf40Q8IXQ3 194 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 CLYBLQ8N0X4 340 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 PPM1NQ8N819 430 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 NUBPLQ8TB37 319 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 TANKQ92844 425 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 RGMAQ96B86 450 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 SARAFQ96BY9 339 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 ATOH8Q96SQ7 321 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 CNPPD1Q9BV87 410 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 EXO5Q9H790 373 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 GRPEL1Q9HAV7 217 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 NMRAL1Q9HBL8 299 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 MS4A12Q9NXJ0 267 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 GRHL1Q9NZI5 618 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 NUDT4Q9NZJ9 180 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 Q9UFV3 132 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 KCNN3Q9UGI6 736 aa12.35□□□□□ -0.43
POLR2J3-219ENST00000608621 NINQ8N4C6 2090 aa12.34□□□□□ -0.43
POLR2J3-219ENST00000608621 TRGV5A0A0B4J1U4 118 aa12.34□□□□□ -0.43
POLR2J3-219ENST00000608621 WASHC1A8K0Z3 465 aa12.34□□□□□ -0.43
POLR2J3-219ENST00000608621 RAD51CO43502 376 aa12.34□□□□□ -0.43
POLR2J3-219ENST00000608621 DYRK3O43781 588 aa12.34□□□□□ -0.43
POLR2J3-219ENST00000608621 WDR1O75083 606 aa12.34□□□□□ -0.43
POLR2J3-219ENST00000608621 NADKO95544 446 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms