RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 CTSL3PQ5NE16 218 aa4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 DEPDC1Q5TB30 811 aa4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 GRHL2Q6ISB3 625 aa4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 POMZP3Q6PJE2 187 aa4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 TIFABQ6ZNK6 161 aa4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 CDHR3Q6ZTQ4 885 aa4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 SYVN1Q86TM6 617 aa4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 TICAM1Q8IUC6 712 aa4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 LRRC25Q8N386 305 aaPredicted RBP4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 ZNF781Q8N8C0 355 aa4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 OR56A1Q8NGH5 318 aa4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 HUS1BQ8NHY5 278 aa4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 OTULINQ96BN8 352 aa4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 ZNF382Q96SR6 550 aa4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 TMEM27Q9HBJ8 222 aa4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 ZBTB20Q9HC78 741 aaPredicted RBP4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 LHX9Q9NQ69 397 aa4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 CUEDC1Q9NWM3 386 aaPredicted RBP4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 ADPRHL2Q9NX46 363 aa4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 PPP4R1LQ9P1A2 415 aa4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 LEF1Q9UJU2 399 aaPredicted RBP4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 ICKQ9UPZ9 632 aa4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 WDR37Q9Y2I8 494 aa4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 POLR1DQ9Y2S0 133 aa4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 CEP250Q9BV73 2442 aa4.9□□□□□ -1.63
SCARNA15-201ENST00000607520 IDSB3KWA1 339 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 AKAP8O43823 692 aaKnown RBP4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 NOBOXO60393 691 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 SLC22A3O75751 556 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 JUNP05412 331 aaKnown RBP4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 IMPA1P29218 277 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 RYKP34925 604 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 GSTM5P46439 218 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 CYB561P49447 251 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 KHKP50053 298 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 SSR4P51571 173 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 SH3BP2P78314 561 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 MC2RQ01718 297 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 AIMP2Q13155 320 aaKnown RBP4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 BLMHQ13867 455 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 SAMD4BQ5PRF9 694 aaKnown RBP4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 HPS6Q86YV9 775 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 CENPLQ8N0S6 344 aaPredicted RBP4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 FBXW8Q8N3Y1 598 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 OR7G3Q8NG95 312 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 OR1N1Q8NGS0 311 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 CYGBQ8WWM9 190 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 DOHHQ9BU89 302 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 DUSP26Q9BV47 211 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 DDA1Q9BW61 102 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 NEUROD4Q9HD90 331 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 ZNF71Q9NQZ8 489 aaPredicted RBP4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 FBXO8Q9NRD0 319 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 THUMPD1Q9NXG2 353 aaKnown RBP4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 KIF17Q9P2E2 1029 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 NKX1-2Q9UD57 310 aaPredicted RBP4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 PPIEQ9UNP9 301 aaKnown RBP4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 MSRB2Q9Y3D2 182 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 RALGAPA2Q2PPJ7 1873 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 THADAQ6YHU6 1953 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 DOCK8Q8NF50 2099 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 C2orf92A0A1B0GVN3 265 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 FAM234BA2RU67 622 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 RTCAO00442 366 aaKnown RBP4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 TLX3O43711 291 aaPredicted RBP4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 ITM2AO43736 263 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 GMFGO60234 142 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 SLC6A2P23975 617 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 ATP6V1E1P36543 226 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 BCL6P41182 706 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 RAB38P57729 211 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 PSME3P61289 254 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 ACVR1Q04771 509 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 SSPNQ14714 243 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 MEP1AQ16819 746 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 CLEC6AQ6EIG7 209 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 CYP2R1Q6VVX0 501 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 PRSS42Q7Z5A4 293 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 DHFR2Q86XF0 187 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 GLB1L3Q8NCI6 653 aaPredicted RBP4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 BHLHE22Q8NFJ8 381 aaPredicted RBP4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 SLC7A6OSQ96CW6 309 aaPredicted RBP4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 NR1H4Q96RI1 486 aaPredicted RBP4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 ZNF717Q9BY31 904 aaPredicted RBP4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 S100A14Q9HCY8 104 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 PARD6AQ9NPB6 346 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 WARS2Q9UGM6 360 aaKnown RBP4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 PCDHGA4Q9Y5G9 962 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 C2orf72A6NCS6 295 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 H0YIG0 161 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 PRAMEF2O60811 474 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 SEMA3DO95025 777 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 PAPLNO95428 1278 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 NSA2O95478 260 aaKnown RBP4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 GBAP04062 536 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 SNRPB2P08579 225 aaKnown RBP4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 RRM2P31350 389 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 C1DQ13901 141 aaKnown RBP4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 FAM53BQ14153 422 aa4.89□□□□□ -1.63
SCARNA15-201ENST00000607520 ADRM1Q16186 407 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms