RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 CBX8Q9HC52 389 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 C6orf50Q9HD87 102 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 SLC22A11Q9NSA0 550 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 SPHK1Q9NYA1 384 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 RSL24D1Q9UHA3 163 aaKnown RBP5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 ST3GAL5Q9UNP4 418 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 MYH11P35749 1972 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 RCCD1A6NED2 376 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 TRIM24O15164 1050 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 CHADO15335 359 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 ITM2AO43736 263 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 SLC28A2O43868 658 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 PRKYO43930 277 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 TAF5LO75529 589 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 PDE9AO76083 593 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 UBOX5O94941 541 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 GPIP06744 558 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 INHBBP09529 407 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 FAM58BPP0C7Q3 252 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 STAG3L1P0CL83 205 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 PSMB5P28074 263 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 DCTDP32321 178 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 FRKP42685 505 aaPredicted RBP5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 NCKAP1LP55160 1127 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 IL5RAQ01344 420 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 RING1Q06587 406 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 IL11RAQ14626 422 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 EXT1Q16394 746 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 PLAC9Q5JTB6 97 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 TSTD2Q5T7W7 516 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 OTUD1Q5VV17 481 aaPredicted RBP5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 TTC23Q5W5X9 447 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 LETMD1Q6P1Q0 360 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 MBOAT1Q6ZNC8 495 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 ACAD11Q709F0 780 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 LINGO2Q7L985 606 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 ZNF546Q86UE3 836 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 DCUN1D3Q8IWE4 304 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 BATF2Q8N1L9 274 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 FAM83FQ8NEG4 500 aaPredicted RBP5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 OR11L1Q8NGX0 322 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 BAHD1Q8TBE0 780 aaPredicted RBP5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 OTUB1Q96FW1 271 aaPredicted RBP5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 AMNQ9BXJ7 453 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 ACTR8Q9H981 624 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 POLR1BQ9H9Y6 1135 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 TMEM138Q9NPI0 162 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 COPZ2Q9P299 210 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 DHCR7Q9UBM7 475 aaKnown RBP5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 ICKQ9UPZ9 632 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 SLC27A6Q9Y2P4 619 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 LYVE1Q9Y5Y7 322 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 CEPT1Q9Y6K0 416 aa5.55□□□□□ -1.52
COL4A3BP-207ENST00000604926 ADGRA2Q96PE1 1338 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 TRBV2A0A0J9YWF9 115 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 MROH6A6NGR9 719 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 PP2D1A8MPX8 630 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 KPNA3O00505 521 aaPredicted RBP5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 SIVA1O15304 175 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 SNAI2O43623 268 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 RGS10O43665 173 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 SPAG7O75391 227 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 ACRP10323 421 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 CD8BP10966 210 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 F3P13726 295 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 CHRNA4P43681 627 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 EPHB3P54753 998 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 SLC29A2Q14542 456 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 GRM4Q14833 912 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 FAM214AQ32MH5 1076 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 PRAMEF18Q5VWM3 479 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 ARL6IP4Q66PJ3 421 aaKnown RBP5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 TMEM220Q6QAJ8 160 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 SLC46A3Q7Z3Q1 461 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 GPAT4Q86UL3 456 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 ECHDC2Q86YB7 292 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 CFAP206Q8IYR0 622 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 SPATA6LQ8N4H0 392 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 TRUB1Q8WWH5 349 aaKnown RBP5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 P2RX5Q93086 422 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 HAVCR1Q96D42 359 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 NARS2Q96I59 477 aaKnown RBP5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 HARBI1Q96MB7 349 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 ZNF583Q96ND8 569 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 CPNE1Q99829 537 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 UTP23Q9BRU9 249 aaKnown RBP5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 AARSD1Q9BTE6 412 aaKnown RBP5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 TMEM208Q9BTX3 173 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 SLC32A1Q9H598 525 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 CSNK1G1Q9HCP0 422 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 B3GNT2Q9NY97 397 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 SEMA5BQ9P283 1151 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 GLS2Q9UI32 602 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 FKBPLQ9UIM3 349 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 DKKL1Q9UK85 242 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 PPP1R3CQ9UQK1 317 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 SAR1BQ9Y6B6 198 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 HSPE1-MOB4S4R3N1 261 aa5.54□□□□□ -1.52
COL4A3BP-207ENST00000604926 SALL1Q9NSC2 1324 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms