RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 NTMQ9P121 344 aa11.61□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 RPS6KA6Q9UK32 745 aa11.61□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 ZNF780BQ9Y6R6 833 aa11.61□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 CCDC88CQ9P219 2028 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 ASXL3Q9C0F0 2248 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 A0A0G2JN53 185 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 RNF103-CHMP3A0A140T963 221 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 H0YIG0 161 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 SOX30O94993 753 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 BMP10O95393 424 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 BAG2O95816 211 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 CFIP05156 583 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 ARAFP10398 606 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 CD1CP29017 333 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 ALDH4A1P30038 563 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 CHI3L1P36222 383 aaPredicted RBP11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 GFERP55789 205 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 PRR5P85299 388 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 SLC14A1Q13336 389 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 ADRM1Q16186 407 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 PRSS53Q2L4Q9 553 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 FAM214AQ32MH5 1076 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 DEFB134Q4QY38 66 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 TBCELQ5QJ74 424 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 GCNT6Q5T4J0 391 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 TMEM71Q6P5X7 295 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 TLDC1Q6P9B6 456 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 RNF111Q6ZNA4 994 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 FAM92BQ6ZTR7 304 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 CCDC80Q76M96 950 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 PTOV1Q86YD1 416 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 TMEM102Q8N9M5 508 aaPredicted RBP11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 TTC29Q8NA56 475 aaPredicted RBP11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 ZCCHC10Q8TBK6 192 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 NCSTNQ92542 709 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 NCLNQ969V3 563 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 CCDC74AQ96AQ1 378 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 EXOSC8Q96B26 276 aaKnown RBP11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 CNRIP1Q96F85 164 aaPredicted RBP11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 MACROD1Q9BQ69 325 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 GLIPR2Q9H4G4 154 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 CXorf36Q9H7Y0 433 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 A4GALTQ9NPC4 353 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 FBXW2Q9UKT8 454 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 MRPS33Q9Y291 106 aaKnown RBP11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 LRRC42Q9Y546 428 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 SDK1Q7Z5N4 2213 aa11.6□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 BDP1A6H8Y1 2624 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 SCN2AQ99250 2005 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 IGHV5-51A0A0C4DH38 117 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 LY6G6EA0A0G2JKS1 128 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 H3BMH7 237 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 PLOD2O00469 737 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 CYR61O00622 381 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 B4GAT1O43505 415 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 ASNA1O43681 348 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 SH3BP5O60239 455 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 IFNA14P01570 189 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 ATP1B1P05026 303 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 FHP07954 510 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 CKMT1AP12532 417 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 NELFEP18615 380 aaKnown RBP11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 FASP25445 335 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 GCGRP47871 477 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 NCBP2P52298 156 aaKnown RBP eCLIP11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 OR1D5P58170 312 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 CHRNB3Q05901 458 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 RUNX2Q13950 521 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 GNA13Q14344 377 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 TRIM61Q5EBN2 209 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 PRAMEF8Q5VWM4 474 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 PRAMEF7Q5VXH5 474 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 C18orf63Q68DL7 685 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 ZC3H14Q6PJT7 736 aaKnown RBP11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 ZNF551Q7Z340 670 aaPredicted RBP11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 MMP21Q8N119 569 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 CA13Q8N1Q1 262 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 LRRC25Q8N386 305 aaPredicted RBP11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 PACRGLQ8N7B6 248 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 ANKFN1Q8N957 763 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 OR4K14Q8NGD5 310 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 OR4D9Q8NGE8 314 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 SUN3Q8TAQ9 357 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 ZNF675Q8TD23 568 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 FIG4Q92562 907 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 FAM162AQ96A26 154 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 TBC1D20Q96BZ9 403 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 ASPSCR1Q9BZE9 553 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 KLHL25Q9H0H3 589 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 VCXQ9H320 206 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 FANCEQ9HB96 536 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 C3orf14Q9HBI5 128 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 AGPAT4Q9NRZ5 378 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 GPATCH2Q9NW75 528 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 SOHLH2Q9NX45 425 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 PTGFRNQ9P2B2 879 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 GMPR2Q9P2T1 348 aaKnown RBP11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 FAF1Q9UNN5 650 aaPredicted RBP11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 C15orf41Q9Y2V0 281 aa11.59□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 NAALAD2Q9Y3Q0 740 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms