RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 SLC6A13Q9NSD5 602 aa21.28■■□□□ 1
IRF3-228ENST00000601291 CMTM6Q9NX76 183 aa21.28■■□□□ 1
IRF3-228ENST00000601291 SLC7A8Q9UHI5 535 aa21.28■■□□□ 1
IRF3-228ENST00000601291 NEUROG3Q9Y4Z2 214 aa21.28■■□□□ 1
IRF3-228ENST00000601291 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.27■■□□□ 1
IRF3-228ENST00000601291 WASHC1A8K0Z3 465 aa21.27■■□□□ 1
IRF3-228ENST00000601291 MYO1GB0I1T2 1018 aa21.27■■□□□ 1
IRF3-228ENST00000601291 NME4O00746 187 aa21.27■■□□□ 1
IRF3-228ENST00000601291 SCRG1O75711 98 aa21.27■■□□□ 1
IRF3-228ENST00000601291 HBQ1P09105 142 aa21.27■■□□□ 1
IRF3-228ENST00000601291 CDK4P11802 303 aa21.27■■□□□ 1
IRF3-228ENST00000601291 ME2P23368 584 aa21.27■■□□□ 1
IRF3-228ENST00000601291 PPP2R1BP30154 601 aa21.27■■□□□ 1
IRF3-228ENST00000601291 MPIP34949 423 aa21.27■■□□□ 1
IRF3-228ENST00000601291 NCBP2P52298 156 aaKnown RBP eCLIP21.27■■□□□ 12e-7■■■■■ 41.8
IRF3-228ENST00000601291 MTPNP58546 118 aa21.27■■□□□ 1
IRF3-228ENST00000601291 MAT1AQ00266 395 aaKnown RBP21.27■■□□□ 1
IRF3-228ENST00000601291 INSM1Q01101 510 aaPredicted RBP21.27■■□□□ 1
IRF3-228ENST00000601291 HSPB3Q12988 150 aa21.27■■□□□ 1
IRF3-228ENST00000601291 CEACAM7Q14002 265 aa21.27■■□□□ 1
IRF3-228ENST00000601291 RHBDD2Q6NTF9 364 aa21.27■■□□□ 1
IRF3-228ENST00000601291 GLRX5Q86SX6 157 aa21.27■■□□□ 1
IRF3-228ENST00000601291 HPS6Q86YV9 775 aa21.27■■□□□ 1
IRF3-228ENST00000601291 CNRIP1Q96F85 164 aaPredicted RBP21.27■■□□□ 1
IRF3-228ENST00000601291 PEX11GQ96HA9 241 aa21.27■■□□□ 1
IRF3-228ENST00000601291 ZNF304Q9HCX3 659 aa21.27■■□□□ 1
IRF3-228ENST00000601291 PCDHB3Q9Y5E6 796 aa21.27■■□□□ 1
IRF3-228ENST00000601291 MAU2Q9Y6X3 613 aa21.27■■□□□ 1
IRF3-228ENST00000601291 SCN3AQ9NY46 2000 aa21.27■■□□□ 1
IRF3-228ENST00000601291 FRYLO94915 3013 aa21.27■■□□□ 1
IRF3-228ENST00000601291 EVPLLA8MZ36 301 aa21.27■□□□□ 0.99
IRF3-228ENST00000601291 POLR1CO15160 346 aaPredicted RBP21.27■□□□□ 0.99
IRF3-228ENST00000601291 HYAL3O43820 417 aaPredicted RBP21.27■□□□□ 0.99
IRF3-228ENST00000601291 FGF5P12034 268 aa21.27■□□□□ 0.99
IRF3-228ENST00000601291 FBLP22087 321 aaKnown RBP21.27■□□□□ 0.99
IRF3-228ENST00000601291 PPIBP23284 216 aaKnown RBP21.27■□□□□ 0.99
IRF3-228ENST00000601291 SOAT1P35610 550 aa21.27■□□□□ 0.99
IRF3-228ENST00000601291 LIMK1P53667 647 aa21.27■□□□□ 0.99
IRF3-228ENST00000601291 EEFSECP57772 596 aaKnown RBP21.27■□□□□ 0.99
IRF3-228ENST00000601291 DSG2Q14126 1118 aa21.27■□□□□ 0.99
IRF3-228ENST00000601291 CEBPEQ15744 281 aa21.27■□□□□ 0.99
IRF3-228ENST00000601291 RNF148Q8N7C7 305 aa21.27■□□□□ 0.99
IRF3-228ENST00000601291 FAM13CQ8NE31 585 aa21.27■□□□□ 0.99
IRF3-228ENST00000601291 OR51Q1Q8NH59 317 aa21.27■□□□□ 0.99
IRF3-228ENST00000601291 CCDC124Q96CT7 223 aaKnown RBP21.27■□□□□ 0.99
IRF3-228ENST00000601291 AMDHD1Q96NU7 426 aa21.27■□□□□ 0.99
IRF3-228ENST00000601291 CPPED1Q9BRF8 314 aaPredicted RBP21.27■□□□□ 0.99
IRF3-228ENST00000601291 TRIM8Q9BZR9 551 aa21.27■□□□□ 0.99
IRF3-228ENST00000601291 PACSIN3Q9UKS6 424 aa21.27■□□□□ 0.99
IRF3-228ENST00000601291 CORO2BQ9UQ03 480 aa21.27■□□□□ 0.99
IRF3-228ENST00000601291 ASCC3Q8N3C0 2202 aaKnown RBP21.26■□□□□ 0.99
IRF3-228ENST00000601291 OTOGLQ3ZCN5 2332 aa21.26■□□□□ 0.99
IRF3-228ENST00000601291 FAM227AF5H4B4 570 aa21.26■□□□□ 0.99
IRF3-228ENST00000601291 DLL1O00548 723 aa21.26■□□□□ 0.99
IRF3-228ENST00000601291 CLDN4O14493 209 aa21.26■□□□□ 0.99
IRF3-228ENST00000601291 DNAJA2O60884 412 aa21.26■□□□□ 0.99
IRF3-228ENST00000601291 C8orf89P0DMQ9 161 aa21.26■□□□□ 0.99
IRF3-228ENST00000601291 GPC1P35052 558 aa21.26■□□□□ 0.99
IRF3-228ENST00000601291 FEN1P39748 380 aaKnown RBP21.26■□□□□ 0.99
IRF3-228ENST00000601291 ZNF551Q7Z340 670 aaPredicted RBP21.26■□□□□ 0.99
IRF3-228ENST00000601291 ZNF595Q8IYB9 648 aa21.26■□□□□ 0.99
IRF3-228ENST00000601291 LRRC25Q8N386 305 aaPredicted RBP21.26■□□□□ 0.99
IRF3-228ENST00000601291 BMPERQ8N8U9 685 aa21.26■□□□□ 0.99
IRF3-228ENST00000601291 COL26A1Q96A83 441 aa21.26■□□□□ 0.99
IRF3-228ENST00000601291 TBC1D20Q96BZ9 403 aa21.26■□□□□ 0.99
IRF3-228ENST00000601291 AURKBQ96GD4 344 aaPredicted RBP21.26■□□□□ 0.99
IRF3-228ENST00000601291 ECSITQ9BQ95 431 aa21.26■□□□□ 0.99
IRF3-228ENST00000601291 GLIPR2Q9H4G4 154 aa21.26■□□□□ 0.99
IRF3-228ENST00000601291 ALG2Q9H553 416 aa21.26■□□□□ 0.99
IRF3-228ENST00000601291 MAP4K5Q9Y4K4 846 aa21.26■□□□□ 0.99
IRF3-228ENST00000601291 TMEM184BQ9Y519 407 aaPredicted RBP21.26■□□□□ 0.99
IRF3-228ENST00000601291 PRORSD1PA6NEY8 169 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 CLIC1O00299 241 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 UQCRC2P22695 453 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 XCR1P46094 333 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 OR1D4P47884 311 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 XKP51811 444 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 MC2RQ01718 297 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 FOLH1Q04609 750 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 GAB1Q13480 694 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 SYT16Q17RD7 645 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.25■□□□□ 0.99
IRF3-228ENST00000601291 ARHGAP40Q5TG30 622 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 C1orf189Q5VU69 101 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 CDCP2Q5VXM1 449 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 PWWP2BQ6NUJ5 590 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 CCDC116Q8IYX3 515 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 TMEM52Q8NDY8 209 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 DEFB124Q8NES8 71 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 CLIP3Q96DZ5 547 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 ZNF681Q96N22 645 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 OR1F2PQ96R84 312 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 SLC35A5Q9BS91 424 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 YIPF2Q9BWQ6 316 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 RBCK1Q9BYM8 510 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 TPT1P8Q9HAU6 139 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 FBXO8Q9NRD0 319 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 SEMA3GQ9NS98 782 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 TOR4AQ9NXH8 423 aa21.25■□□□□ 0.99
IRF3-228ENST00000601291 SUCOQ9UBS9 1254 aaKnown RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms