RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 REP15Q6BDI9 236 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 MRPL14Q6P1L8 145 aaKnown RBP21.55■■□□□ 1.04
IRF3-227ENST00000600911 FAM9CQ8IZT9 166 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 SUN3Q8TAQ9 357 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 STT3BQ8TCJ2 826 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 MR1Q95460 341 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 TSLPQ969D9 159 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 MTERF3Q96E29 417 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 ZBTB18Q99592 522 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 ZPBPQ9BS86 351 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 TRIM4Q9C037 500 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 CCDC154A6NI56 674 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 CDRT15L2A8MXV6 281 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 GUCY1B2O75343 617 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 RECKO95980 971 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 PPP2R1BP30154 601 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 SOX18P35713 384 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 KIR3DL1P43629 444 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 ACTN3Q08043 901 aaPredicted RBP21.55■■□□□ 1.04
IRF3-227ENST00000600911 CYLC2Q14093 348 aaPredicted RBP21.55■■□□□ 1.04
IRF3-227ENST00000600911 NKG7Q16617 165 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 MLIPQ5VWP3 458 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 OR52E8Q6IFG1 317 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 DGAT2L6Q6ZPD8 337 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 OVCH1Q7RTY7 1134 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 SCUBE1Q8IWY4 988 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 RP9Q8TA86 221 aaKnown RBP21.55■■□□□ 1.04
IRF3-227ENST00000600911 OR52E6Q96RD3 313 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 SOX17Q9H6I2 414 aaPredicted RBP21.55■■□□□ 1.04
IRF3-227ENST00000600911 CLK4Q9HAZ1 481 aaKnown RBP21.55■■□□□ 1.04
IRF3-227ENST00000600911 SLC35C2Q9NQQ7 365 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 TAS2R7Q9NYW3 318 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 EHD3Q9NZN3 535 aa21.55■■□□□ 1.04
IRF3-227ENST00000600911 IFT80Q9P2H3 777 aaPredicted RBP21.55■■□□□ 1.04
IRF3-227ENST00000600911 AHCTF1Q8WYP5 2266 aa21.54■■□□□ 1.04
IRF3-227ENST00000600911 A0A1W2PP18 115 aa21.54■■□□□ 1.04
IRF3-227ENST00000600911 SDHBP21912 280 aa21.54■■□□□ 1.04
IRF3-227ENST00000600911 FRKP42685 505 aaPredicted RBP21.54■■□□□ 1.04
IRF3-227ENST00000600911 RHAGQ02094 409 aa21.54■■□□□ 1.04
IRF3-227ENST00000600911 SRSF11Q05519 484 aaKnown RBP21.54■■□□□ 1.04
IRF3-227ENST00000600911 GTDC1Q4AE62 458 aa21.54■■□□□ 1.04
IRF3-227ENST00000600911 ZNF551Q7Z340 670 aaPredicted RBP21.54■■□□□ 1.04
IRF3-227ENST00000600911 R3HCC1LQ7Z5L2 792 aaKnown RBP21.54■■□□□ 1.04
IRF3-227ENST00000600911 ZNF764Q96H86 408 aaPredicted RBP21.54■■□□□ 1.04
IRF3-227ENST00000600911 SPSB2Q99619 263 aa21.54■■□□□ 1.04
IRF3-227ENST00000600911 BHLHE41Q9C0J9 482 aaPredicted RBP21.54■■□□□ 1.04
IRF3-227ENST00000600911 PRTFDC1Q9NRG1 225 aa21.54■■□□□ 1.04
IRF3-227ENST00000600911 TAGLN3Q9UI15 199 aa21.54■■□□□ 1.04
IRF3-227ENST00000600911 VSTM2BA6NLU5 285 aa21.53■■□□□ 1.04
IRF3-227ENST00000600911 C6orf47O95873 294 aa21.53■■□□□ 1.04
IRF3-227ENST00000600911 IL6P05231 212 aa21.53■■□□□ 1.04
IRF3-227ENST00000600911 ZGLP1P0C6A0 271 aa21.53■■□□□ 1.04
IRF3-227ENST00000600911 PRDX6P30041 224 aa21.53■■□□□ 1.04
IRF3-227ENST00000600911 TLX1P31314 330 aaPredicted RBP21.53■■□□□ 1.04
IRF3-227ENST00000600911 LTB4RQ15722 352 aa21.53■■□□□ 1.04
IRF3-227ENST00000600911 CEBPEQ15744 281 aa21.53■■□□□ 1.04
IRF3-227ENST00000600911 C6orf15Q6UXA7 325 aaPredicted RBP21.53■■□□□ 1.04
IRF3-227ENST00000600911 GTF2H4Q92759 462 aa21.53■■□□□ 1.04
IRF3-227ENST00000600911 SLC25A23Q9BV35 468 aa21.53■■□□□ 1.04
IRF3-227ENST00000600911 VN1R1Q9GZP7 353 aa21.53■■□□□ 1.04
IRF3-227ENST00000600911 GLIPR2Q9H4G4 154 aa21.53■■□□□ 1.04
IRF3-227ENST00000600911 MKKSQ9NPJ1 570 aaPredicted RBP21.53■■□□□ 1.04
IRF3-227ENST00000600911 TMEM45AQ9NWC5 275 aa21.53■■□□□ 1.04
IRF3-227ENST00000600911 ZNF282Q9UDV7 671 aaPredicted RBP21.53■■□□□ 1.04
IRF3-227ENST00000600911 SPACA6W5XKT8 324 aa21.53■■□□□ 1.04
IRF3-227ENST00000600911 FREM2Q5SZK8 3169 aa21.53■■□□□ 1.04
IRF3-227ENST00000600911 PCSK5Q92824 1860 aa21.52■■□□□ 1.04
IRF3-227ENST00000600911 MYO1GB0I1T2 1018 aa21.52■■□□□ 1.04
IRF3-227ENST00000600911 NVLO15381 856 aaKnown RBP21.52■■□□□ 1.04
IRF3-227ENST00000600911 PTPN6P29350 595 aa21.52■■□□□ 1.04
IRF3-227ENST00000600911 BNIP1Q12981 228 aa21.52■■□□□ 1.04
IRF3-227ENST00000600911 DPY19L1Q2PZI1 675 aa21.52■■□□□ 1.04
IRF3-227ENST00000600911 DNAJC14Q6Y2X3 702 aaPredicted RBP21.52■■□□□ 1.04
IRF3-227ENST00000600911 MED25Q71SY5 747 aa21.52■■□□□ 1.04
IRF3-227ENST00000600911 CCDC116Q8IYX3 515 aa21.52■■□□□ 1.04
IRF3-227ENST00000600911 CLEC4FQ8N1N0 589 aa21.52■■□□□ 1.04
IRF3-227ENST00000600911 NSL1Q96IY1 281 aa21.52■■□□□ 1.04
IRF3-227ENST00000600911 OR1F2PQ96R84 312 aa21.52■■□□□ 1.04
IRF3-227ENST00000600911 TRIM8Q9BZR9 551 aa21.52■■□□□ 1.04
IRF3-227ENST00000600911 TGIF2Q9GZN2 237 aa21.52■■□□□ 1.04
IRF3-227ENST00000600911 WDR41Q9HAD4 459 aa21.52■■□□□ 1.04
IRF3-227ENST00000600911 EBAG9O00559 213 aa21.51■■□□□ 1.03
IRF3-227ENST00000600911 PDPK1O15530 556 aa21.51■■□□□ 1.03
IRF3-227ENST00000600911 GSNP06396 782 aa21.51■■□□□ 1.03
IRF3-227ENST00000600911 HOXB9P17482 250 aaPredicted RBP21.51■■□□□ 1.03
IRF3-227ENST00000600911 SLC13A2Q13183 592 aa21.51■■□□□ 1.03
IRF3-227ENST00000600911 MINDY4Q4G0A6 757 aa21.51■■□□□ 1.03
IRF3-227ENST00000600911 MFSD4BQ5TF39 518 aa21.51■■□□□ 1.03
IRF3-227ENST00000600911 MSRB3Q8IXL7 192 aa21.51■■□□□ 1.03
IRF3-227ENST00000600911 ZNF595Q8IYB9 648 aa21.51■■□□□ 1.03
IRF3-227ENST00000600911 SIMC1Q8NDZ2 872 aa21.51■■□□□ 1.03
IRF3-227ENST00000600911 OR4K14Q8NGD5 310 aa21.51■■□□□ 1.03
IRF3-227ENST00000600911 CT55Q8WUE5 264 aa21.51■■□□□ 1.03
IRF3-227ENST00000600911 TANKQ92844 425 aa21.51■■□□□ 1.03
IRF3-227ENST00000600911 PPWD1Q96BP3 646 aaKnown RBP21.51■■□□□ 1.03
IRF3-227ENST00000600911 AMDHD1Q96NU7 426 aa21.51■■□□□ 1.03
IRF3-227ENST00000600911 TMEM121BQ9BXQ6 578 aaPredicted RBP21.51■■□□□ 1.03
IRF3-227ENST00000600911 SLC26A1Q9H2B4 701 aa21.51■■□□□ 1.03
IRF3-227ENST00000600911 ANKRA2Q9H9E1 313 aa21.51■■□□□ 1.03
IRF3-227ENST00000600911 NDUFAF1Q9Y375 327 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms