RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 MRPL9Q9BYD2 267 aaKnown RBP17.48■□□□□ 0.39
UPF1-210ENST00000600689 TBC1D17Q9HA65 648 aa17.48■□□□□ 0.39
UPF1-210ENST00000600689 ZDHHC3Q9NYG2 299 aa17.48■□□□□ 0.39
UPF1-210ENST00000600689 PRKAB1Q9Y478 270 aa17.48■□□□□ 0.39
UPF1-210ENST00000600689 ISM1B1AKI9 464 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 BCHEP06276 602 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 EVI2BP34910 448 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 ETV5P41161 510 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 MAP2K3P46734 347 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 AVPR1BP47901 424 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 SLC6A12P48065 614 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 ETV1P50549 477 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 XKP51811 444 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 MVDP53602 400 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 LCN1P1Q5VSP4 162 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 WDR48Q8TAF3 677 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 ZNF296Q8WUU4 475 aaPredicted RBP17.47■□□□□ 0.39
UPF1-210ENST00000600689 SLC6A18Q96N87 628 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 GDF15Q99988 308 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 SLC23A1Q9UHI7 598 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 GSAPA4D1B5 854 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 FFAR1O14842 300 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 C1SP09871 688 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 FLYWCH1Q4VC44 716 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 CNIH2Q6PI25 160 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 GPR155Q7Z3F1 870 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 GEMIN6Q8WXD5 167 aaKnown RBP17.47■□□□□ 0.39
UPF1-210ENST00000600689 MED30Q96HR3 178 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 DEFB118Q96PH6 123 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 MAPKAP1Q9BPZ7 522 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 TMEM175Q9BSA9 504 aa17.47■□□□□ 0.39
UPF1-210ENST00000600689 POLR2J3Q9H1A7 115 aaKnown RBP17.47■□□□□ 0.39
UPF1-210ENST00000600689 PLEKHB1Q9UF11 243 aaPredicted RBP17.47■□□□□ 0.39
UPF1-210ENST00000600689 EXO1Q9UQ84 846 aaKnown RBP17.47■□□□□ 0.39
UPF1-210ENST00000600689 ANKDD1BA6NHY2 528 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 E9PQ18 207 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 CD79BP40259 229 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 CTSOP43234 321 aaPredicted RBP17.46■□□□□ 0.39
UPF1-210ENST00000600689 XCR1P46094 333 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 RPS5P46782 204 aaKnown RBP17.46■□□□□ 0.39
UPF1-210ENST00000600689 ALDH9A1P49189 494 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 GLYR1Q49A26 553 aaPredicted RBP17.46■□□□□ 0.39
UPF1-210ENST00000600689 CCDC149Q6ZUS6 474 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 FAM109AQ8N4B1 249 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 OR7G3Q8NG95 312 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 C2orf15Q8WU43 125 aaKnown RBP17.46■□□□□ 0.39
UPF1-210ENST00000600689 RASSF5Q8WWW0 418 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 DACT3Q96B18 629 aaPredicted RBP17.46■□□□□ 0.39
UPF1-210ENST00000600689 ZBED6CLQ96FA7 236 aaPredicted RBP17.46■□□□□ 0.39
UPF1-210ENST00000600689 MKRN2Q9H000 416 aaKnown RBP17.46■□□□□ 0.39
UPF1-210ENST00000600689 ZNF282Q9UDV7 671 aaPredicted RBP17.46■□□□□ 0.39
UPF1-210ENST00000600689 HYKKA2RU49 373 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 PITPNM1O00562 1244 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 LHCGRP22888 699 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 TAS2R50P59544 299 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 MRPL28Q13084 256 aaKnown RBP17.46■□□□□ 0.39
UPF1-210ENST00000600689 ASAH1Q13510 395 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 BRAT1Q6PJG6 821 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 GHDCQ8N2G8 530 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 CHCHD4Q8N4Q1 142 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 SLAIN1Q8ND83 568 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 OTULINQ96BN8 352 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 IGSF21Q96ID5 467 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 TMED9Q9BVK6 235 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 MND1Q9BWT6 205 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 NARFLQ9H6Q4 476 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 ZDHHC6Q9H6R6 413 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 CWH43Q9H720 699 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 ENPP4Q9Y6X5 453 aa17.46■□□□□ 0.39
UPF1-210ENST00000600689 C5orf58C9J3I9 102 aa17.46■□□□□ 0.38
UPF1-210ENST00000600689 POLR1CO15160 346 aaPredicted RBP17.46■□□□□ 0.38
UPF1-210ENST00000600689 PRKYO43930 277 aa17.46■□□□□ 0.38
UPF1-210ENST00000600689 RBBP4Q09028 425 aa17.46■□□□□ 0.38
UPF1-210ENST00000600689 PUM1Q14671 1186 aaKnown RBP eCLIP17.46■□□□□ 0.38
UPF1-210ENST00000600689 ZNF284Q2VY69 593 aa17.46■□□□□ 0.38
UPF1-210ENST00000600689 SPOUT1Q5T280 376 aaKnown RBP17.46■□□□□ 0.38
UPF1-210ENST00000600689 C19orf48Q6RUI8 117 aa17.46■□□□□ 0.38
UPF1-210ENST00000600689 AGTRAPQ6RW13 159 aa17.46■□□□□ 0.38
UPF1-210ENST00000600689 LHFPL3Q86UP9 236 aa17.46■□□□□ 0.38
UPF1-210ENST00000600689 LAS2Q8IYD9 372 aa17.46■□□□□ 0.38
UPF1-210ENST00000600689 RDH10Q8IZV5 341 aa17.46■□□□□ 0.38
UPF1-210ENST00000600689 ZFAND1Q8TCF1 268 aa17.46■□□□□ 0.38
UPF1-210ENST00000600689 SLC25A46Q96AG3 418 aa17.46■□□□□ 0.38
UPF1-210ENST00000600689 PPCDCQ96CD2 204 aa17.46■□□□□ 0.38
UPF1-210ENST00000600689 OR4K3Q96R72 315 aa17.46■□□□□ 0.38
UPF1-210ENST00000600689 CNOT2Q9NZN8 540 aaKnown RBP17.46■□□□□ 0.38
UPF1-210ENST00000600689 TRPM5Q9NZQ8 1165 aa17.46■□□□□ 0.38
UPF1-210ENST00000600689 CKAP5Q14008 2032 aa17.45■□□□□ 0.38
UPF1-210ENST00000600689 ARHGEF33A8MVX0 844 aa17.45■□□□□ 0.38
UPF1-210ENST00000600689 SLC16A8O95907 504 aa17.45■□□□□ 0.38
UPF1-210ENST00000600689 KLK1P06870 262 aa17.45■□□□□ 0.38
UPF1-210ENST00000600689 ZNF8P17098 575 aaPredicted RBP17.45■□□□□ 0.38
UPF1-210ENST00000600689 PRKACBP22694 351 aa17.45■□□□□ 0.38
UPF1-210ENST00000600689 SOX18P35713 384 aa17.45■□□□□ 0.38
UPF1-210ENST00000600689 GZMKP49863 264 aa17.45■□□□□ 0.38
UPF1-210ENST00000600689 CTBP2P56545 445 aa17.45■□□□□ 0.38
UPF1-210ENST00000600689 PIN1Q13526 163 aaPredicted RBP17.45■□□□□ 0.38
UPF1-210ENST00000600689 PRSS53Q2L4Q9 553 aa17.45■□□□□ 0.38
UPF1-210ENST00000600689 ANXA8L1Q5VT79 327 aa17.45■□□□□ 0.38
UPF1-210ENST00000600689 XKRXQ6PP77 449 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms