RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 RGS9BPQ6ZS82 235 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 TAOK1Q7L7X3 1001 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 GOLGA7Q7Z5G4 137 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 GOLM1Q8NBJ4 401 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 NUBPLQ8TB37 319 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 WDR20Q8TBZ3 569 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 AGAP11Q8TF27 550 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 SENP5Q96HI0 755 aaPredicted RBP14.66□□□□□ -0.06
VRK3-221ENST00000600284 DGAT2Q96PD7 388 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 PHF12Q96QT6 1004 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 FMO2Q99518 471 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 PELOQ9BRX2 385 aaKnown RBP14.66□□□□□ -0.06
VRK3-221ENST00000600284 DDX31Q9H8H2 851 aaKnown RBP14.66□□□□□ -0.06
VRK3-221ENST00000600284 LIN28AQ9H9Z2 209 aaKnown RBP14.66□□□□□ -0.06
VRK3-221ENST00000600284 PLSCR2Q9NRY7 297 aa14.66□□□□□ -0.06
VRK3-221ENST00000600284 CPSF2Q9P2I0 782 aaKnown RBP14.66□□□□□ -0.06
VRK3-221ENST00000600284 DMGDHQ9UI17 866 aaKnown RBP14.66□□□□□ -0.06
VRK3-221ENST00000600284 A0A1B0GTH9 108 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 STX16-NPEPL1H3BU86 382 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 STX16O14662 325 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 HS6ST1O60243 411 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 CLDN9O95484 217 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 CLDN14O95500 239 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 ETHE1O95571 254 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 CNR1P21554 472 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 GALNSP34059 522 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 PTGER1P34995 402 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 PTGS2P35354 604 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 PTGER4P35408 488 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 BSGP35613 385 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 SOX3P41225 446 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 PLIN5Q00G26 463 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 TNFRSF17Q02223 184 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 ID2Q02363 134 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 CPSF6Q16630 551 aaKnown RBP eCLIP14.65□□□□□ -0.06
VRK3-221ENST00000600284 TSNAXIP1Q2TAA8 658 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 ARHGAP11AQ6P4F7 1023 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 RTL4Q6ZR62 310 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 FGD2Q7Z6J4 655 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 ST13P4Q8IZP2 240 aaPredicted RBP14.65□□□□□ -0.06
VRK3-221ENST00000600284 RNF175Q8N4F7 328 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 ZNF321PQ8N8H1 164 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 FAM57AQ8TBR7 257 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 DMRTA2Q96SC8 542 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 NTMT1Q9BV86 223 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 SORBS1Q9BX66 1292 aaKnown RBP14.65□□□□□ -0.06
VRK3-221ENST00000600284 ZNF717Q9BY31 904 aaPredicted RBP14.65□□□□□ -0.06
VRK3-221ENST00000600284 DEPPQ9NTK1 212 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.65□□□□□ -0.06
VRK3-221ENST00000600284 ZNF180Q9UJW8 692 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 RNF11Q9Y3C5 154 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 ATG4BQ9Y4P1 393 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 ASB4Q9Y574 426 aa14.65□□□□□ -0.06
VRK3-221ENST00000600284 A0A0A6YYD5 115 aa14.64□□□□□ -0.07
VRK3-221ENST00000600284 LRRC14BA6NHZ5 514 aa14.64□□□□□ -0.07
VRK3-221ENST00000600284 SIX3O95343 332 aaPredicted RBP14.64□□□□□ -0.07
VRK3-221ENST00000600284 ACSL3O95573 720 aa14.64□□□□□ -0.07
VRK3-221ENST00000600284 GPR75O95800 540 aa14.64□□□□□ -0.07
VRK3-221ENST00000600284 IGKV3-11P04433 115 aa14.64□□□□□ -0.07
VRK3-221ENST00000600284 CTAGE8P0CG41 777 aa14.64□□□□□ -0.07
VRK3-221ENST00000600284 ALOX15P16050 662 aaPredicted RBP14.64□□□□□ -0.07
VRK3-221ENST00000600284 GRNP28799 593 aaKnown RBP14.64□□□□□ -0.07
VRK3-221ENST00000600284 HNRNPH2P55795 449 aaKnown RBP14.64□□□□□ -0.07
VRK3-221ENST00000600284 GPR85P60893 370 aa14.64□□□□□ -0.07
VRK3-221ENST00000600284 FOLH1Q04609 750 aa14.64□□□□□ -0.07
VRK3-221ENST00000600284 GTF3C1Q12789 2109 aa14.64□□□□□ -0.07
VRK3-221ENST00000600284 PIGGQ5H8A4 983 aa14.64□□□□□ -0.07
VRK3-221ENST00000600284 NDUFAF5Q5TEU4 345 aa14.64□□□□□ -0.07
VRK3-221ENST00000600284 C18orf63Q68DL7 685 aa14.64□□□□□ -0.07
VRK3-221ENST00000600284 GK5Q6ZS86 529 aa14.64□□□□□ -0.07
VRK3-221ENST00000600284 CTAGE4Q8IX94 777 aa14.64□□□□□ -0.07
VRK3-221ENST00000600284 OR4N5Q8IXE1 308 aa14.64□□□□□ -0.07
VRK3-221ENST00000600284 PLD6Q8N2A8 252 aaKnown RBP14.64□□□□□ -0.07
VRK3-221ENST00000600284 SLC15A4Q8N697 577 aa14.64□□□□□ -0.07
VRK3-221ENST00000600284 OR2M7Q8NG81 312 aa14.64□□□□□ -0.07
VRK3-221ENST00000600284 IFT81Q8WYA0 676 aa14.64□□□□□ -0.07
VRK3-221ENST00000600284 ATP6V1E2Q96A05 226 aa14.64□□□□□ -0.07
VRK3-221ENST00000600284 SCYL1Q96KG9 808 aa14.64□□□□□ -0.07
VRK3-221ENST00000600284 PAFAH2Q99487 392 aa14.64□□□□□ -0.07
VRK3-221ENST00000600284 SERPINI1Q99574 410 aa14.64□□□□□ -0.07
VRK3-221ENST00000600284 FAM173AQ9BQD7 235 aa14.64□□□□□ -0.07
VRK3-221ENST00000600284 NOL11Q9H8H0 719 aaKnown RBP14.64□□□□□ -0.07
VRK3-221ENST00000600284 WDR41Q9HAD4 459 aa14.64□□□□□ -0.07
VRK3-221ENST00000600284 NCOA6Q14686 2063 aaPredicted RBP14.63□□□□□ -0.07
VRK3-221ENST00000600284 ENO4A6NNW6 628 aa14.63□□□□□ -0.07
VRK3-221ENST00000600284 ACOT7O00154 380 aa14.63□□□□□ -0.07
VRK3-221ENST00000600284 ADAM10O14672 748 aa14.63□□□□□ -0.07
VRK3-221ENST00000600284 SMIM24O75264 130 aa14.63□□□□□ -0.07
VRK3-221ENST00000600284 SEMA3DO95025 777 aa14.63□□□□□ -0.07
VRK3-221ENST00000600284 FAM58BPP0C7Q3 252 aa14.63□□□□□ -0.07
VRK3-221ENST00000600284 RFC3P40938 356 aa14.63□□□□□ -0.07
VRK3-221ENST00000600284 CCNG1P51959 295 aa14.63□□□□□ -0.07
VRK3-221ENST00000600284 PPIAP62937 165 aaKnown RBP14.63□□□□□ -0.07
VRK3-221ENST00000600284 TBL3Q12788 808 aaKnown RBP14.63□□□□□ -0.07
VRK3-221ENST00000600284 SPRED3Q2MJR0 410 aa14.63□□□□□ -0.07
VRK3-221ENST00000600284 ZNF750Q32MQ0 723 aa14.63□□□□□ -0.07
VRK3-221ENST00000600284 UBAP2Q5T6F2 1119 aaKnown RBP14.63□□□□□ -0.07
VRK3-221ENST00000600284 TMEM211Q6ICI0 200 aa14.63□□□□□ -0.07
VRK3-221ENST00000600284 CYP20A1Q6UW02 462 aa14.63□□□□□ -0.07
VRK3-221ENST00000600284 SLC22A16Q86VW1 577 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms