RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 XPNPEP2O43895 674 aa13.7□□□□□ -0.22
VRK3-217ENST00000599538 CTSVO60911 334 aa13.7□□□□□ -0.22
VRK3-217ENST00000599538 JRKO75564 520 aa13.7□□□□□ -0.22
VRK3-217ENST00000599538 AIFM1O95831 613 aa13.7□□□□□ -0.22
VRK3-217ENST00000599538 TFPTP0C1Z6 253 aa13.7□□□□□ -0.22
VRK3-217ENST00000599538 POLR2CP19387 275 aaPredicted RBP13.7□□□□□ -0.22
VRK3-217ENST00000599538 AKT2P31751 481 aa13.7□□□□□ -0.22
VRK3-217ENST00000599538 BMP8BP34820 402 aa13.7□□□□□ -0.22
VRK3-217ENST00000599538 TRA2BP62995 288 aaKnown RBP13.7□□□□□ -0.22
VRK3-217ENST00000599538 PUM1Q14671 1186 aaKnown RBP eCLIP13.7□□□□□ -0.22
VRK3-217ENST00000599538 GPR19Q15760 415 aa13.7□□□□□ -0.22
VRK3-217ENST00000599538 RFX4Q33E94 735 aa13.7□□□□□ -0.22
VRK3-217ENST00000599538 REEP3Q6NUK4 255 aa13.7□□□□□ -0.22
VRK3-217ENST00000599538 FBXO42Q6P3S6 717 aa13.7□□□□□ -0.22
VRK3-217ENST00000599538 B3GNT6Q6ZMB0 384 aa13.7□□□□□ -0.22
VRK3-217ENST00000599538 Q6ZPB1 254 aaPredicted RBP13.7□□□□□ -0.22
VRK3-217ENST00000599538 GPR141Q7Z602 305 aa13.7□□□□□ -0.22
VRK3-217ENST00000599538 TTC29Q8NA56 475 aaPredicted RBP13.7□□□□□ -0.22
VRK3-217ENST00000599538 SUN3Q8TAQ9 357 aa13.7□□□□□ -0.22
VRK3-217ENST00000599538 HDAC2Q92769 488 aaKnown RBP13.7□□□□□ -0.22
VRK3-217ENST00000599538 NRBF2Q96F24 287 aa13.7□□□□□ -0.22
VRK3-217ENST00000599538 KCNC2Q96PR1 638 aa13.7□□□□□ -0.22
VRK3-217ENST00000599538 OR2A14Q96R47 310 aa13.7□□□□□ -0.22
VRK3-217ENST00000599538 GAS2L1Q99501 681 aaPredicted RBP13.7□□□□□ -0.22
VRK3-217ENST00000599538 EPYCQ99645 322 aa13.7□□□□□ -0.22
VRK3-217ENST00000599538 WFDC6Q9BQY6 131 aa13.7□□□□□ -0.22
VRK3-217ENST00000599538 ANKRA2Q9H9E1 313 aa13.7□□□□□ -0.22
VRK3-217ENST00000599538 KRT84Q9NSB2 600 aa13.7□□□□□ -0.22
VRK3-217ENST00000599538 DDX18Q9NVP1 670 aaKnown RBP13.7□□□□□ -0.22
VRK3-217ENST00000599538 RSL24D1Q9UHA3 163 aaKnown RBP13.7□□□□□ -0.22
VRK3-217ENST00000599538 ANGPT4Q9Y264 503 aa13.7□□□□□ -0.22
VRK3-217ENST00000599538 HEMK1Q9Y5R4 338 aaPredicted RBP13.7□□□□□ -0.22
VRK3-217ENST00000599538 TNFRSF11BO00300 401 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 TNFRSF10CO14798 259 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 DNAJB6O75190 326 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 NME6O75414 186 aaPredicted RBP13.69□□□□□ -0.22
VRK3-217ENST00000599538 DRD2P14416 443 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 NCBP2P52298 156 aaKnown RBP eCLIP13.69□□□□□ -0.22
VRK3-217ENST00000599538 CDH12P55289 794 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 IL5RAQ01344 420 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 CDK5R2Q13319 367 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 GANABQ14697 944 aaKnown RBP13.69□□□□□ -0.22
VRK3-217ENST00000599538 ZBED5Q49AG3 693 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 FBXO43Q4G163 708 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 XAF1Q6GPH4 301 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 ZNF773Q6PK81 442 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 CLVS1Q8IUQ0 354 aaPredicted RBP13.69□□□□□ -0.22
VRK3-217ENST00000599538 CCDC116Q8IYX3 515 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 FAM160A2Q8N612 972 aaPredicted RBP13.69□□□□□ -0.22
VRK3-217ENST00000599538 GPR32P1Q8NGA4 272 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 OR10G6Q8NH81 332 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 PSMA8Q8TAA3 256 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 RLN3Q8WXF3 142 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 TOE1Q96GM8 510 aaKnown RBP13.69□□□□□ -0.22
VRK3-217ENST00000599538 ZNF764Q96H86 408 aaPredicted RBP13.69□□□□□ -0.22
VRK3-217ENST00000599538 NAA50Q9GZZ1 169 aaKnown RBP13.69□□□□□ -0.22
VRK3-217ENST00000599538 RAD21L1Q9H4I0 556 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 ACSS1Q9NUB1 689 aaPredicted RBP13.69□□□□□ -0.22
VRK3-217ENST00000599538 PTTG2Q9NZH5 202 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 KIF17Q9P2E2 1029 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 RHCGQ9UBD6 479 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 SNX7Q9UNH6 387 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 PCDHGB3Q9Y5G1 929 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 TMX2-CTNND1H3BSU7 103 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 SLC1A7O00341 560 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 P2RX6O15547 441 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 MBTPS2O43462 519 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 SH3BP5O60239 455 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 DPM1O60762 260 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 OR12D1P0DN82 309 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 NDUFS1P28331 727 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 FEN1P39748 380 aaKnown RBP13.69□□□□□ -0.22
VRK3-217ENST00000599538 BTN3A2P78410 334 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 SPIBQ01892 262 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 SYPL1Q16563 259 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 RBM48Q5RL73 367 aaKnown RBP13.69□□□□□ -0.22
VRK3-217ENST00000599538 HMGN2P46Q86SG4 172 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 BPIFB6Q8NFQ5 453 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 OR4C15Q8NGM1 316 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 FBLIM1Q8WUP2 373 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 LZICQ8WZA0 190 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 FEVQ99581 238 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 MAPKAP1Q9BPZ7 522 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 RHNO1Q9BSD3 238 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 YIPF4Q9BSR8 244 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 CXorf21Q9HAI6 301 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 A4GALTQ9NPC4 353 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 TMEM74BQ9NUR3 256 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 CES1P1Q9UKY3 287 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 LAMA1P25391 3075 aa13.69□□□□□ -0.22
VRK3-217ENST00000599538 OR6C74A6NCV1 312 aa13.68□□□□□ -0.22
VRK3-217ENST00000599538 PTGES3LE9PB15 166 aa13.68□□□□□ -0.22
VRK3-217ENST00000599538 ZW10O43264 779 aa13.68□□□□□ -0.22
VRK3-217ENST00000599538 SEMA7AO75326 666 aa13.68□□□□□ -0.22
VRK3-217ENST00000599538 UGT2B7P16662 529 aa13.68□□□□□ -0.22
VRK3-217ENST00000599538 FMO3P31513 532 aa13.68□□□□□ -0.22
VRK3-217ENST00000599538 RYKP34925 604 aa13.68□□□□□ -0.22
VRK3-217ENST00000599538 GPC1P35052 558 aa13.68□□□□□ -0.22
VRK3-217ENST00000599538 PRKAG1P54619 331 aa13.68□□□□□ -0.22
VRK3-217ENST00000599538 YPEL5P62699 121 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms