RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 SEMA4GQ9NTN9 838 aa22■■□□□ 1.11
SYMPK-212ENST00000598896 HCN4Q9Y3Q4 1203 aa22■■□□□ 1.11
SYMPK-212ENST00000598896 GMEB1Q9Y692 573 aa22■■□□□ 1.11
SYMPK-212ENST00000598896 MYO1GB0I1T2 1018 aa22■■□□□ 1.11
SYMPK-212ENST00000598896 D6RAR5 112 aa22■■□□□ 1.11
SYMPK-212ENST00000598896 CHST10O43529 356 aa22■■□□□ 1.11
SYMPK-212ENST00000598896 NTRK1P04629 796 aa22■■□□□ 1.11
SYMPK-212ENST00000598896 FEN1P39748 380 aaKnown RBP22■■□□□ 1.11
SYMPK-212ENST00000598896 GCGRP47871 477 aa22■■□□□ 1.11
SYMPK-212ENST00000598896 CDK9P50750 372 aaKnown RBP22■■□□□ 1.11
SYMPK-212ENST00000598896 TRAP1Q12931 704 aaKnown RBP22■■□□□ 1.11
SYMPK-212ENST00000598896 MLC1Q15049 377 aa22■■□□□ 1.11
SYMPK-212ENST00000598896 FXNQ16595 210 aa22■■□□□ 1.11
SYMPK-212ENST00000598896 OR52E8Q6IFG1 317 aa22■■□□□ 1.11
SYMPK-212ENST00000598896 CALHM3Q86XJ0 350 aa22■■□□□ 1.11
SYMPK-212ENST00000598896 PTRH1Q86Y79 214 aaKnown RBP22■■□□□ 1.11
SYMPK-212ENST00000598896 DPYSL5Q9BPU6 564 aa22■■□□□ 1.11
SYMPK-212ENST00000598896 GPATCH2Q9NW75 528 aa22■■□□□ 1.11
SYMPK-212ENST00000598896 HCN3Q9P1Z3 774 aa22■■□□□ 1.11
SYMPK-212ENST00000598896 FTSJ1Q9UET6 329 aa22■■□□□ 1.11
SYMPK-212ENST00000598896 KRT36O76013 467 aa21.99■■□□□ 1.11
SYMPK-212ENST00000598896 GPX2P18283 190 aa21.99■■□□□ 1.11
SYMPK-212ENST00000598896 ATP6V1B2P21281 511 aa21.99■■□□□ 1.11
SYMPK-212ENST00000598896 HTR1EP28566 365 aa21.99■■□□□ 1.11
SYMPK-212ENST00000598896 TLX1P31314 330 aaPredicted RBP21.99■■□□□ 1.11
SYMPK-212ENST00000598896 NCBP2P52298 156 aaKnown RBP eCLIP21.99■■□□□ 1.11
SYMPK-212ENST00000598896 EMP3P54852 163 aa21.99■■□□□ 1.11
SYMPK-212ENST00000598896 MAT1AQ00266 395 aaKnown RBP21.99■■□□□ 1.11
SYMPK-212ENST00000598896 BNIP2Q12982 314 aa21.99■■□□□ 1.11
SYMPK-212ENST00000598896 CEBPEQ15744 281 aa21.99■■□□□ 1.11
SYMPK-212ENST00000598896 CYP2R1Q6VVX0 501 aa21.99■■□□□ 1.11
SYMPK-212ENST00000598896 OR2T12Q8NG77 320 aa21.99■■□□□ 1.11
SYMPK-212ENST00000598896 NEUROD4Q9HD90 331 aa21.99■■□□□ 1.11
SYMPK-212ENST00000598896 CUTCQ9NTM9 273 aa21.99■■□□□ 1.11
SYMPK-212ENST00000598896 SNX8Q9Y5X2 465 aa21.99■■□□□ 1.11
SYMPK-212ENST00000598896 HYAL3O43820 417 aaPredicted RBP21.98■■□□□ 1.11
SYMPK-212ENST00000598896 NCK1P16333 377 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 NTSP30990 170 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 SOAT1P35610 550 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 MVDP53602 400 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 ITGA1P56199 1179 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 RAB38P57729 211 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 SYT16Q17RD7 645 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 B3GNT8Q7Z7M8 397 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 OR4N5Q8IXE1 308 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 CCDC116Q8IYX3 515 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 TRIML2Q8N7C3 387 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 PSMA8Q8TAA3 256 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 MMABQ96EY8 250 aaPredicted RBP21.98■■□□□ 1.11
SYMPK-212ENST00000598896 BBS4Q96RK4 519 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 ENTPD4Q9Y227 616 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 OTOGLQ3ZCN5 2332 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 COL27A1Q8IZC6 1860 aaPredicted RBP21.98■■□□□ 1.11
SYMPK-212ENST00000598896 EVPLLA8MZ36 301 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 ARPC2O15144 300 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 GP1BAP07359 652 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 SPIDRQ14159 915 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 TTLL10Q6ZVT0 673 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 DHFR2Q86XF0 187 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 NAXDQ8IW45 347 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 GPR135Q8IZ08 494 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 JADE3Q92613 823 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 RBCK1Q9BYM8 510 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 PARD6AQ9NPB6 346 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 PRDM9Q9NQV7 894 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 FAM86C1Q9NVL1 165 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 DHCR7Q9UBM7 475 aaKnown RBP21.98■■□□□ 1.11
SYMPK-212ENST00000598896 CLCA2Q9UQC9 943 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 PCDHB3Q9Y5E6 796 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 SPACA6W5XKT8 324 aa21.98■■□□□ 1.11
SYMPK-212ENST00000598896 H0Y3Z8 333 aa21.97■■□□□ 1.11
SYMPK-212ENST00000598896 ZNF749O43361 778 aa21.97■■□□□ 1.11
SYMPK-212ENST00000598896 LDB3O75112 727 aa21.97■■□□□ 1.11
SYMPK-212ENST00000598896 CASP9P55211 416 aa21.97■■□□□ 1.11
SYMPK-212ENST00000598896 SKP1P63208 163 aa21.97■■□□□ 1.11
SYMPK-212ENST00000598896 ABHD18Q0P651 414 aa21.97■■□□□ 1.11
SYMPK-212ENST00000598896 CLPPQ16740 277 aaPredicted RBP21.97■■□□□ 1.11
SYMPK-212ENST00000598896 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.97■■□□□ 1.119e-8■■■■□ 24.7
SYMPK-212ENST00000598896 PHF19Q5T6S3 580 aa21.97■■□□□ 1.11
SYMPK-212ENST00000598896 SLC26A7Q8TE54 656 aa21.97■■□□□ 1.11
SYMPK-212ENST00000598896 FAM120BQ96EK7 910 aaKnown RBP21.97■■□□□ 1.11
SYMPK-212ENST00000598896 TMEM9BQ9NQ34 198 aa21.97■■□□□ 1.11
SYMPK-212ENST00000598896 SERTAD3Q9UJW9 196 aa21.97■■□□□ 1.11
SYMPK-212ENST00000598896 PSME2Q9UL46 239 aa21.97■■□□□ 1.11
SYMPK-212ENST00000598896 AP3M1Q9Y2T2 418 aa21.97■■□□□ 1.11
SYMPK-212ENST00000598896 FGF17O60258 216 aa21.96■■□□□ 1.11
SYMPK-212ENST00000598896 B4GALT2O60909 372 aa21.96■■□□□ 1.11
SYMPK-212ENST00000598896 CBFA2T3O75081 653 aa21.96■■□□□ 1.11
SYMPK-212ENST00000598896 PSMG1O95456 288 aa21.96■■□□□ 1.11
SYMPK-212ENST00000598896 CSNK2A2P19784 350 aaPredicted RBP21.96■■□□□ 1.11
SYMPK-212ENST00000598896 PDX1P52945 283 aa21.96■■□□□ 1.11
SYMPK-212ENST00000598896 ID2Q02363 134 aa21.96■■□□□ 1.11
SYMPK-212ENST00000598896 FOLH1Q04609 750 aa21.96■■□□□ 1.11
SYMPK-212ENST00000598896 RGNQ15493 299 aa21.96■■□□□ 1.11
SYMPK-212ENST00000598896 FAM214AQ32MH5 1076 aa21.96■■□□□ 1.11
SYMPK-212ENST00000598896 COX20Q5RI15 118 aa21.96■■□□□ 1.11
SYMPK-212ENST00000598896 NIPAL1Q6NVV3 410 aa21.96■■□□□ 1.11
SYMPK-212ENST00000598896 TLDC1Q6P9B6 456 aa21.96■■□□□ 1.11
SYMPK-212ENST00000598896 ANGPTL8Q6UXH0 198 aa21.96■■□□□ 1.11
SYMPK-212ENST00000598896 SERPINA11Q86U17 422 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms