RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 CHN1P15882 459 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 CREB1P16220 341 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 CLCN2P51788 898 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 KCNC4Q03721 635 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 FOLH1Q04609 750 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 TUBA3CQ13748 450 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 CCNYL2Q5T2Q4 361 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 RPUSD3Q6P087 351 aaKnown RBP15.6■□□□□ 0.09
SSBP4-204ENST00000597724 TUBA3EQ6PEY2 450 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 GBP7Q8N8V2 638 aaPredicted RBP15.6■□□□□ 0.09
SSBP4-204ENST00000597724 OR14A16Q8NHC5 309 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 CHTF18Q8WVB6 975 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 DAZLQ92904 295 aaKnown RBP15.6■□□□□ 0.09
SSBP4-204ENST00000597724 UCN3Q969E3 161 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 NCLNQ969V3 563 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 VMP1Q96GC9 406 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 FAM111AQ96PZ2 611 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 SMC6Q96SB8 1091 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 BARD1Q99728 777 aaKnown RBP15.6■□□□□ 0.09
SSBP4-204ENST00000597724 GATA5Q9BWX5 397 aaPredicted RBP15.6■□□□□ 0.09
SSBP4-204ENST00000597724 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.6■□□□□ 0.099e-7■■■□□ 18.5
SSBP4-204ENST00000597724 WDR41Q9HAD4 459 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 ASF1BQ9NVP2 202 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 TEX10Q9NXF1 929 aaPredicted RBP15.6■□□□□ 0.09
SSBP4-204ENST00000597724 ABI3Q9P2A4 366 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 SLC17A7Q9P2U7 560 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 NTNG1Q9Y2I2 539 aa15.6■□□□□ 0.09
SSBP4-204ENST00000597724 TRBV11-1A0A0K0K1C0 115 aa15.59■□□□□ 0.09
SSBP4-204ENST00000597724 ARHGAP10A1A4S6 786 aa15.59■□□□□ 0.09
SSBP4-204ENST00000597724 GLOD5A6NK44 160 aa15.59■□□□□ 0.09
SSBP4-204ENST00000597724 C17orf105B2RV13 164 aa15.59■□□□□ 0.09
SSBP4-204ENST00000597724 CDK2AP1O14519 115 aa15.59■□□□□ 0.09
SSBP4-204ENST00000597724 TRIM13O60858 407 aa15.59■□□□□ 0.09
SSBP4-204ENST00000597724 GPR75O95800 540 aa15.59■□□□□ 0.09
SSBP4-204ENST00000597724 TNNI3P19429 210 aa15.59■□□□□ 0.09
SSBP4-204ENST00000597724 DEKP35659 375 aaKnown RBP15.59■□□□□ 0.09
SSBP4-204ENST00000597724 CD96P40200 585 aa15.59■□□□□ 0.09
SSBP4-204ENST00000597724 STT3AP46977 705 aa15.59■□□□□ 0.09
SSBP4-204ENST00000597724 FOXA1P55317 472 aa15.59■□□□□ 0.09
SSBP4-204ENST00000597724 MLF1P58340 268 aa15.59■□□□□ 0.09
SSBP4-204ENST00000597724 C1orf52Q8N6N3 182 aaKnown RBP15.59■□□□□ 0.09
SSBP4-204ENST00000597724 GALNT11Q8NCW6 608 aa15.59■□□□□ 0.09
SSBP4-204ENST00000597724 TCP10LQ8TDR4 215 aa15.59■□□□□ 0.09
SSBP4-204ENST00000597724 UTP23Q9BRU9 249 aaKnown RBP15.59■□□□□ 0.09
SSBP4-204ENST00000597724 ACPTQ9BZG2 426 aa15.59■□□□□ 0.09
SSBP4-204ENST00000597724 SENP1Q9P0U3 644 aa15.59■□□□□ 0.09
SSBP4-204ENST00000597724 RELNP78509 3460 aa15.59■□□□□ 0.09
SSBP4-204ENST00000597724 GABRR3A8MPY1 467 aa15.58■□□□□ 0.08
SSBP4-204ENST00000597724 PGRMC2O15173 223 aa15.58■□□□□ 0.08
SSBP4-204ENST00000597724 RGS16O15492 202 aaPredicted RBP15.58■□□□□ 0.08
SSBP4-204ENST00000597724 TYROBPO43914 113 aa15.58■□□□□ 0.08
SSBP4-204ENST00000597724 VPS4BO75351 444 aa15.58■□□□□ 0.08
SSBP4-204ENST00000597724 ZFAND5O76080 213 aa15.58■□□□□ 0.08
SSBP4-204ENST00000597724 DDAH2O95865 285 aa15.58■□□□□ 0.08
SSBP4-204ENST00000597724 ALOX15P16050 662 aaPredicted RBP15.58■□□□□ 0.08
SSBP4-204ENST00000597724 ALDH3A1P30838 453 aa15.58■□□□□ 0.08
SSBP4-204ENST00000597724 ST13P50502 369 aaKnown RBP15.58■□□□□ 0.08
SSBP4-204ENST00000597724 MAPK12P53778 367 aa15.58■□□□□ 0.08
SSBP4-204ENST00000597724 ASPHQ12797 758 aa15.58■□□□□ 0.08
SSBP4-204ENST00000597724 NDUFAF5Q5TEU4 345 aa15.58■□□□□ 0.08
SSBP4-204ENST00000597724 ATCAYQ86WG3 371 aa15.58■□□□□ 0.08
SSBP4-204ENST00000597724 ST13P4Q8IZP2 240 aaPredicted RBP15.58■□□□□ 0.08
SSBP4-204ENST00000597724 SUN3Q8TAQ9 357 aa15.58■□□□□ 0.08
SSBP4-204ENST00000597724 PPWD1Q96BP3 646 aaKnown RBP15.58■□□□□ 0.08
SSBP4-204ENST00000597724 TM4SF18Q96CE8 201 aa15.58■□□□□ 0.08
SSBP4-204ENST00000597724 RBM18Q96H35 190 aaKnown RBP15.58■□□□□ 0.08
SSBP4-204ENST00000597724 DGAT2Q96PD7 388 aa15.58■□□□□ 0.08
SSBP4-204ENST00000597724 ZIM3Q96PE6 472 aa15.58■□□□□ 0.08
SSBP4-204ENST00000597724 CLMPQ9H6B4 373 aa15.58■□□□□ 0.08
SSBP4-204ENST00000597724 TNFRSF12AQ9NP84 129 aa15.58■□□□□ 0.08
SSBP4-204ENST00000597724 MAP10Q9P2G4 905 aa15.58■□□□□ 0.08
SSBP4-204ENST00000597724 VPS4AQ9UN37 437 aa15.58■□□□□ 0.08
SSBP4-204ENST00000597724 TMEM200CA6NKL6 621 aa15.57■□□□□ 0.08
SSBP4-204ENST00000597724 PRKNO60260 465 aaPredicted RBP15.57■□□□□ 0.08
SSBP4-204ENST00000597724 GUCY1B2O75343 617 aa15.57■□□□□ 0.08
SSBP4-204ENST00000597724 COX7A2P14406 83 aa15.57■□□□□ 0.08
SSBP4-204ENST00000597724 SERPINB3P29508 390 aa15.57■□□□□ 0.08
SSBP4-204ENST00000597724 TRA2BP62995 288 aaKnown RBP15.57■□□□□ 0.08
SSBP4-204ENST00000597724 PLIN5Q00G26 463 aa15.57■□□□□ 0.08
SSBP4-204ENST00000597724 HMGCS1Q01581 520 aa15.57■□□□□ 0.08
SSBP4-204ENST00000597724 ZNF468Q5VIY5 522 aaPredicted RBP15.57■□□□□ 0.08
SSBP4-204ENST00000597724 OR52E8Q6IFG1 317 aa15.57■□□□□ 0.08
SSBP4-204ENST00000597724 SCIMPQ6UWF3 145 aa15.57■□□□□ 0.08
SSBP4-204ENST00000597724 DGAT2L6Q6ZPD8 337 aa15.57■□□□□ 0.08
SSBP4-204ENST00000597724 ZNF321PQ8N8H1 164 aa15.57■□□□□ 0.08
SSBP4-204ENST00000597724 MDS2Q8NDY4 140 aa15.57■□□□□ 0.08
SSBP4-204ENST00000597724 SLC2A12Q8TD20 617 aa15.57■□□□□ 0.08
SSBP4-204ENST00000597724 THAP3Q8WTV1 239 aaPredicted RBP15.57■□□□□ 0.08
SSBP4-204ENST00000597724 C11orf24Q96F05 449 aaPredicted RBP15.57■□□□□ 0.08
SSBP4-204ENST00000597724 SENP5Q96HI0 755 aaPredicted RBP15.57■□□□□ 0.08
SSBP4-204ENST00000597724 SIGLEC12Q96PQ1 595 aa15.57■□□□□ 0.08
SSBP4-204ENST00000597724 TRMOQ9BU70 441 aa15.57■□□□□ 0.08
SSBP4-204ENST00000597724 MECRQ9BV79 373 aa15.57■□□□□ 0.08
SSBP4-204ENST00000597724 SHCBP1LQ9BZQ2 653 aa15.57■□□□□ 0.08
SSBP4-204ENST00000597724 OR8D2Q9GZM6 311 aa15.57■□□□□ 0.08
SSBP4-204ENST00000597724 ANKRD10Q9NXR5 420 aa15.57■□□□□ 0.08
SSBP4-204ENST00000597724 MCM8Q9UJA3 840 aa15.57■□□□□ 0.08
SSBP4-204ENST00000597724 PCDHGB6Q9Y5F9 930 aa15.57■□□□□ 0.08
SSBP4-204ENST00000597724 PRAMEF2O60811 474 aa15.56■□□□□ 0.08
SSBP4-204ENST00000597724 ERLIN1O75477 346 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms