RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 ZNF793Q6ZN11 406 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 TTLL10Q6ZVT0 673 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 ARHGEF39Q8N4T4 335 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 CPSF7Q8N684 471 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 BMPERQ8N8U9 685 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 OR9A4Q8NGU2 314 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 CLHC1Q8NHS4 586 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 APOBEC4Q8WW27 367 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 ERP27Q96DN0 273 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 CLIP3Q96DZ5 547 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 MVB12AQ96EY5 273 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 MMABQ96EY8 250 aaPredicted RBP11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 C11orf24Q96F05 449 aaPredicted RBP11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 SMIM10Q96HG1 83 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 SLC45A3Q96JT2 553 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 CTRCQ99895 268 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 NPLQ9BXD5 320 aaPredicted RBP11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 ACTR5Q9H9F9 607 aaPredicted RBP11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 MYNNQ9NPC7 610 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 FBXO8Q9NRD0 319 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 SDR39U1Q9NRG7 319 aaPredicted RBP11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 ZIM2Q9NZV7 527 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 PCDHB3Q9Y5E6 796 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 GPR45Q9Y5Y3 372 aa11.37□□□□□ -0.59
SHKBP1-213ENST00000597325 SGK494L7N484 410 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 TMPRSS11DO60235 418 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 PRMT3O60678 531 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 CPNE3O75131 537 aaKnown RBP11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 SLC22A3O75751 556 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 LRATO95237 230 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 NR2F6P10588 404 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 CCL4P13236 92 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 ALAS2P22557 587 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 JAK1P23458 1154 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 TACR1P25103 407 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 ADSLP30566 484 aaPredicted RBP11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 TLX1P31314 330 aaPredicted RBP11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 BUD31P41223 144 aaPredicted RBP11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 MRPL19P49406 292 aaKnown RBP11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 TAS2R50P59544 299 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 KLC1Q07866 573 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 HEPACAMQ14CZ8 416 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 AGKQ53H12 422 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 RHBDD2Q6NTF9 364 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 PWWP2BQ6NUJ5 590 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 TCTN3Q6NUS6 607 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 PRMT9Q6P2P2 845 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 PRSS41Q7RTY9 318 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 CLNKQ7Z7G1 428 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 GPR180Q86V85 440 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 METTL27Q8N6F8 245 aaPredicted RBP11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 PROKR1Q8TCW9 393 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 ADAMTS18Q8TE60 1221 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 C16orf78Q8WTQ4 265 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 MARVELD3Q96A59 401 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 PRPF18Q99633 342 aaKnown RBP11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 ZPBPQ9BS86 351 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 ASPSCR1Q9BZE9 553 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 MYLK2Q9H1R3 596 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 ZNF385DQ9H6B1 395 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 WDR41Q9HAD4 459 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 CLK4Q9HAZ1 481 aaKnown RBP11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 LYRM4Q9HD34 91 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 APMAPQ9HDC9 416 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 MIEF1Q9NQG6 463 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 MS4A12Q9NXJ0 267 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 ARMCX1Q9P291 453 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 DHCR7Q9UBM7 475 aaKnown RBP11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 BAIAP2L1Q9UHR4 511 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 FBXW2Q9UKT8 454 aa11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 WBP11Q9Y2W2 641 aaKnown RBP11.36□□□□□ -0.59
SHKBP1-213ENST00000597325 H0YIG0 161 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 SCAMP2O15127 329 aaKnown RBP11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 HNRNPRO43390 633 aaKnown RBP11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 AKAP10O43572 662 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 FOXS1O43638 330 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 MED26O95402 600 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 IL3P08700 152 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 RNH1P13489 461 aaKnown RBP11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 COX7A2P14406 83 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 FBLP22087 321 aaKnown RBP11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 GPX3P22352 226 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 CPN2P22792 545 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 ALDH9A1P49189 494 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 LIM2P55344 173 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 CLDN8P56748 225 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 KCNK10P57789 538 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 UFM1P61960 85 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 OLR1P78380 273 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 TNFRSF17Q02223 184 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 C2orf80Q0P641 193 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 CDC20Q12834 499 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 KLF10Q13118 480 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 DPY19L1Q2PZI1 675 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 NDUFAF5Q5TEU4 345 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 TMEM164Q5U3C3 297 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 PRAMEF17Q5VTA0 474 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 C1orf189Q5VU69 101 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 MRM1Q6IN84 353 aaKnown RBP11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 PAOXQ6QHF9 649 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms