RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.1□□□□□ -0.15
TRIM28-207ENST00000597136 C16orf78Q8WTQ4 265 aa14.1□□□□□ -0.15
TRIM28-207ENST00000597136 C8orf44Q96CB5 159 aa14.1□□□□□ -0.15
TRIM28-207ENST00000597136 EGLN2Q96KS0 407 aa14.1□□□□□ -0.15
TRIM28-207ENST00000597136 TSSK3Q96PN8 268 aa14.1□□□□□ -0.15
TRIM28-207ENST00000597136 SERINC2Q96SA4 455 aa14.1□□□□□ -0.15
TRIM28-207ENST00000597136 KCMF1Q9P0J7 381 aa14.1□□□□□ -0.15
TRIM28-207ENST00000597136 HS3ST3B1Q9Y662 390 aa14.1□□□□□ -0.15
TRIM28-207ENST00000597136 COL6A6A6NMZ7 2263 aa14.1□□□□□ -0.15
TRIM28-207ENST00000597136 ANKRD28O15084 1053 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 B4GALT2O60909 372 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 FAM58BPP0C7Q3 252 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 PCSK2P16519 638 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 GPX3P22352 226 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 HNRNPFP52597 415 aaKnown RBP14.09□□□□□ -0.15
TRIM28-207ENST00000597136 EMP2P54851 167 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 NME5P56597 212 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 STX1BP61266 288 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 BTG2P78543 158 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 CHAF1BQ13112 559 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 SLAMF1Q13291 335 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 UBAP2LQ14157 1087 aaKnown RBP14.09□□□□□ -0.15
TRIM28-207ENST00000597136 MINDY4Q4G0A6 757 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 PDCD4Q53EL6 469 aaKnown RBP14.09□□□□□ -0.15
TRIM28-207ENST00000597136 MFSD4BQ5TF39 518 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 RIPOR1Q6ZS17 1223 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 CLNKQ7Z7G1 428 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 MIER2Q8N344 545 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 CLHC1Q8NHS4 586 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 MAPKAP1Q9BPZ7 522 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 VN1R1Q9GZP7 353 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 ARMCX1Q9P291 453 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 NXT1Q9UKK6 140 aaKnown RBP14.09□□□□□ -0.15
TRIM28-207ENST00000597136 LHX6Q9UPM6 363 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 ASB4Q9Y574 426 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 KCNMB2Q9Y691 235 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 PSMD12O00232 456 aaPredicted RBP14.09□□□□□ -0.15
TRIM28-207ENST00000597136 SOCS6O14544 535 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 B3GALT2O43825 422 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 ALOX12BO75342 701 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 HEXBP07686 556 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 RNH1P13489 461 aaKnown RBP14.09□□□□□ -0.15
TRIM28-207ENST00000597136 MMP11P24347 488 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 ASMTP46597 345 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 LIM2P55344 173 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 TAS2R50P59544 299 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 UFM1P61960 85 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 TRA2BP62995 288 aaKnown RBP14.09□□□□□ -0.15
TRIM28-207ENST00000597136 SKP1P63208 163 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 LINC00303Q3SY05 128 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 NIPAL1Q6NVV3 410 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 KIRREL2Q6UWL6 708 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 LANCL3Q6ZV70 420 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 FAM9CQ8IZT9 166 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 FITM2Q8N6M3 262 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 TBC1D20Q96BZ9 403 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 TM4SF18Q96CE8 201 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 TEX37Q96LM6 180 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 CSF3RQ99062 836 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 CCDC106Q9BWC9 280 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 MYNNQ9NPC7 610 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 MRGBPQ9NV56 204 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 FBXW2Q9UKT8 454 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 DAPP1Q9UN19 280 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 POLHQ9Y253 713 aa14.09□□□□□ -0.15
TRIM28-207ENST00000597136 ARGFXA6NJG6 315 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 SLC22A3O75751 556 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 FHP07954 510 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 JAK1P23458 1154 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 ADSLP30566 484 aaPredicted RBP14.08□□□□□ -0.16
TRIM28-207ENST00000597136 GSTM5P46439 218 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 HNRNPH2P55795 449 aaKnown RBP14.08□□□□□ -0.16
TRIM28-207ENST00000597136 CLDN8P56748 225 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 RHAGQ02094 409 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 KLF10Q13118 480 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 CPZQ66K79 652 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 FAM71E1Q6IPT2 247 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 PAOXQ6QHF9 649 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 MRGPREQ86SM8 312 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 RIMKLAQ8IXN7 391 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 KRTCAP2Q8N6L1 136 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 FAM47BQ8NA70 645 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 CDC26Q8NHZ8 85 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 TTC9Q92623 222 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 UCN3Q969E3 161 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 ERP27Q96DN0 273 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 NPLQ9BXD5 320 aaPredicted RBP14.08□□□□□ -0.16
TRIM28-207ENST00000597136 DPY30Q9C005 99 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 LYRM4Q9HD34 91 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 SEMA3GQ9NS98 782 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 C14orf105Q9NVL8 296 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 LYARQ9NX58 379 aaKnown RBP14.08□□□□□ -0.16
TRIM28-207ENST00000597136 P4HTMQ9NXG6 502 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 ZIM2Q9NZV7 527 aa14.08□□□□□ -0.16
TRIM28-207ENST00000597136 RALYQ9UKM9 306 aaKnown RBP14.08□□□□□ -0.16
TRIM28-207ENST00000597136 WBP11Q9Y2W2 641 aaKnown RBP14.08□□□□□ -0.16
TRIM28-207ENST00000597136 SPTA1P02549 2419 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 MYOCOSA0A1B0GUC4 107 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 WASHC1A8K0Z3 465 aa14.07□□□□□ -0.16
TRIM28-207ENST00000597136 CAPN14A8MX76 684 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms