RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 CA7P43166 264 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 HNRNPH2P55795 449 aaKnown RBP9.77□□□□□ -0.85
CCDC9-203ENST00000596938 HERVK_113P63132 956 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 RNF4P78317 190 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 TNFRSF17Q02223 184 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 ID2Q02363 134 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 FOLH1Q04609 750 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 IFT88Q13099 833 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 C1QL3Q5VWW1 255 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 TTC19Q6DKK2 380 aaPredicted RBP9.77□□□□□ -0.85
CCDC9-203ENST00000596938 MTFR2Q6P444 385 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 CYP20A1Q6UW02 462 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 BNC2Q6ZN30 1099 aaPredicted RBP9.77□□□□□ -0.85
CCDC9-203ENST00000596938 Q6ZPB1 254 aaPredicted RBP9.77□□□□□ -0.85
CCDC9-203ENST00000596938 MDGA2Q7Z553 956 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 FJX1Q86VR8 437 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 SULF2Q8IWU5 870 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 OR4N5Q8IXE1 308 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 ST13P4Q8IZP2 240 aaPredicted RBP9.77□□□□□ -0.85
CCDC9-203ENST00000596938 CYP4Z2PQ8N1L4 340 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 ZNF321PQ8N8H1 164 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 OR4F6Q8NGB9 312 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 C16orf52Q8NHV5 167 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 SLC2A12Q8TD20 617 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 TRPC4APQ8TEL6 797 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 ZNF721Q8TF20 911 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 ZNF483Q8TF39 744 aaPredicted RBP9.77□□□□□ -0.85
CCDC9-203ENST00000596938 MTFMTQ96DP5 389 aaKnown RBP9.77□□□□□ -0.85
CCDC9-203ENST00000596938 DGAT2Q96PD7 388 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 PELOQ9BRX2 385 aaKnown RBP9.77□□□□□ -0.85
CCDC9-203ENST00000596938 ERVK-6Q9BXR3 956 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 OR8D2Q9GZM6 311 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 EPB41L4BQ9H329 900 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 L2HGDHQ9H9P8 463 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 WDR41Q9HAD4 459 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 TIMMDC1Q9NPL8 285 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 SEMA4BQ9NPR2 832 aaPredicted RBP9.77□□□□□ -0.85
CCDC9-203ENST00000596938 TMEM216Q9P0N5 145 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 DCDC2Q9UHG0 476 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 ADAM29Q9UKF5 820 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 NPIPA1Q9UND3 350 aa9.77□□□□□ -0.85
CCDC9-203ENST00000596938 NBPF19A0A087WUL8 3843 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 TRGV8A0A0C4DH27 118 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 A1L4Q6 167 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 WASHC1A8K0Z3 465 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 A8MVJ9 347 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 WWP2O00308 870 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 PPP6CO00743 305 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 GSTA1P08263 222 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 SLC35E2P0CK97 266 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 ALOX15P16050 662 aaPredicted RBP9.76□□□□□ -0.85
CCDC9-203ENST00000596938 IMPDH1P20839 514 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 ARL1P40616 181 aaPredicted RBP9.76□□□□□ -0.85
CCDC9-203ENST00000596938 HK2P52789 917 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 CASP6P55212 293 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 CDH13P55290 713 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 PLIN5Q00G26 463 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 CLCQ05315 142 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 MPEG1Q2M385 716 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 PIGGQ5H8A4 983 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 RNFT1Q5M7Z0 435 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 TEX35Q5T0J7 233 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 C16orf47Q6ZP98 133 aaPredicted RBP9.76□□□□□ -0.85
CCDC9-203ENST00000596938 PAGE2Q7Z2X7 111 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 NUDT13Q86X67 352 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 SPPL2CQ8IUH8 684 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 METTL4Q8N3J2 472 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 CPSF7Q8N684 471 aaKnown RBP9.76□□□□□ -0.85
CCDC9-203ENST00000596938 ZFP62Q8NB50 900 aaPredicted RBP9.76□□□□□ -0.85
CCDC9-203ENST00000596938 NUBPLQ8TB37 319 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 ASB15Q8WXK1 588 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.76□□□□□ -0.85
CCDC9-203ENST00000596938 PPWD1Q96BP3 646 aaKnown RBP9.76□□□□□ -0.85
CCDC9-203ENST00000596938 FBXL20Q96IG2 436 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 ART5Q96L15 291 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 SGCZQ96LD1 299 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 RASL10BQ96S79 203 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 ELOVL6Q9H5J4 265 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 LIN28AQ9H9Z2 209 aaKnown RBP9.76□□□□□ -0.85
CCDC9-203ENST00000596938 BRF2Q9HAW0 419 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 NMRK1Q9NWW6 199 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 HPF1Q9NWY4 346 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 PSMC3IPQ9P2W1 217 aaPredicted RBP9.76□□□□□ -0.85
CCDC9-203ENST00000596938 COPS7AQ9UBW8 275 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 SNX6Q9UNH7 406 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 ERVK-11Q9UQG0 969 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 SCN2AQ99250 2005 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 HIVEP3Q5T1R4 2406 aa9.76□□□□□ -0.85
CCDC9-203ENST00000596938 UNC79Q9P2D8 2635 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 CPAMD8Q8IZJ3 1885 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 A0A1B0GTL3 188 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 CCL21O00585 134 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 PGRMC2O15173 223 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 DLX3O60479 287 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 ZG16O60844 167 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 GUCY1B2O75343 617 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 OR6B1O95007 311 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 KLK1P06870 262 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 NR2F6P10588 404 aa9.75□□□□□ -0.85
CCDC9-203ENST00000596938 ZNF24P17028 368 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms