RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 CD22P20273 847 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 ADH7P40394 386 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 SSR2P43308 183 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 DLX5P56178 289 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 KCNJ2P63252 427 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 FOLH1Q04609 750 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 FOXO1Q12778 655 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 MPEG1Q2M385 716 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 HYAL4Q2M3T9 481 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 SLC25A35Q3KQZ1 300 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 PIGGQ5H8A4 983 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 CDKL4Q5MAI5 379 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 PRAMEF20Q5VT98 475 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 CHSY3Q70JA7 882 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 UBE3DQ7Z6J8 389 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 ZZZ3Q8IYH5 903 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 ZBED8Q8IZ13 594 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 NUBPLQ8TB37 319 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 DOK4Q8TEW6 326 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 ZNF473Q8WTR7 871 aaKnown RBP9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 CDKL2Q92772 493 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 UBE2E3Q969T4 207 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 ANKRD9Q96BM1 317 aaPredicted RBP9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 PPWD1Q96BP3 646 aaKnown RBP9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 WDR34Q96EX3 536 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 RBM18Q96H35 190 aaKnown RBP9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 SENP5Q96HI0 755 aaPredicted RBP9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 JSRP1Q96MG2 331 aaPredicted RBP9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 CNPPD1Q9BV87 410 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 MS4A8Q9BY19 250 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 POLDIP3Q9BY77 421 aaKnown RBP9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 SMYD2Q9NRG4 433 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 CCM2LQ9NUG4 571 aaPredicted RBP9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 TRMT1Q9NXH9 659 aaKnown RBP9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 RNF112Q9ULX5 631 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 L3MBTL1Q9Y468 752 aa9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 SETD2Q9BYW2 2564 aaPredicted RBP9.75□□□□□ -0.85
CHMP2A-202ENST00000596708 TACC2O95359 2948 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 FAM47E-STBD1D6RA91 191 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 E7ESA3 106 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 FGF17O60258 216 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 STMN1P16949 149 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 HIST1H1TP22492 207 aaPredicted RBP9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 SSTR1P30872 391 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 UQCRC1P31930 480 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 KIR2DL3P43628 341 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 STT3AP46977 705 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 RAP1GDS1P52306 607 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 ATP6V0D1P61421 351 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 ILF2Q12905 390 aaKnown RBP9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 SLAMF1Q13291 335 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 BIKQ13323 160 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 DDX39BQ13838 428 aaKnown RBP9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 OR4D1Q15615 310 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 TBCCQ15814 346 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 MED27Q6P2C8 311 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 LIX1Q8N485 282 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 BBOF1Q8ND07 529 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 FAM13CQ8NE31 585 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 CHDHQ8NE62 594 aaPredicted RBP9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 PYROXD1Q8WU10 500 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 CMTM7Q96FZ5 175 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 ART5Q96L15 291 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 FOXC2Q99958 501 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 CD244Q9BZW8 370 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 RPF2Q9H7B2 306 aaKnown RBP9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 B4GALT7Q9UBV7 327 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 PTBP2Q9UKA9 531 aaKnown RBP9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 BOKQ9UMX3 212 aaPredicted RBP9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 SNX24Q9Y343 169 aa9.74□□□□□ -0.85
CHMP2A-202ENST00000596708 IQANK1A0A1B0GTG1 560 aa9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 HSPB2A8KAH6 182 aa9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 CXorf49A8MYA2 514 aaPredicted RBP9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 CTAG2O75638 210 aa9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 WISP3O95389 354 aaPredicted RBP9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 RFPL3SP0C7P2 107 aa9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 ENDOUP21128 410 aaKnown RBP9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 SERPINB3P29508 390 aa9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 TLX1P31314 330 aaPredicted RBP9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 TRPC1P48995 793 aa9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 PPP2R2AP63151 447 aa9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 PLIN5Q00G26 463 aa9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 TBL3Q12788 808 aaKnown RBP9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 CEBPEQ15744 281 aa9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 HSPB2Q16082 182 aa9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 ZNF791Q3KP31 576 aaPredicted RBP9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 TMEM35AQ53FP2 167 aa9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 RIPPLY2Q5TAB7 128 aa9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 DEPDC1Q5TB30 811 aa9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 OR4C11Q6IEV9 310 aa9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 SLC29A4Q7RTT9 530 aa9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 LRRC70Q7Z2Q7 622 aa9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 C9orf40Q8IXQ3 194 aa9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 SLC15A4Q8N697 577 aa9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 PDPRQ8NCN5 879 aa9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 GOT1L1Q8NHS2 421 aaPredicted RBP9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 STAG3L4Q8TBR4 150 aa9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 PAQR8Q8TEZ7 354 aa9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 NINJ1Q92982 152 aa9.73□□□□□ -0.85
CHMP2A-202ENST00000596708 RGMAQ96B86 450 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms