RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 QPCTLQ9NXS2 382 aa9.18□□□□□ -0.94
LIG1-209ENST00000596104 CTNNAL1Q9UBT7 734 aa9.18□□□□□ -0.94
LIG1-209ENST00000596104 EDARQ9UNE0 448 aa9.18□□□□□ -0.94
LIG1-209ENST00000596104 CHMP2BQ9UQN3 213 aa9.18□□□□□ -0.94
LIG1-209ENST00000596104 A0A1B0GTL3 188 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 FAM95CA0A1B0GW59 222 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 GOLGA6L6A8MZA4 724 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 RTCAO00442 366 aaKnown RBP9.17□□□□□ -0.94
LIG1-209ENST00000596104 FGF17O60258 216 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 SCELO95171 688 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 ATE1O95260 518 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 WISP3O95389 354 aaPredicted RBP9.17□□□□□ -0.94
LIG1-209ENST00000596104 EPORP19235 508 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 BMP5P22003 454 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 ATP5A1P25705 553 aaKnown RBP9.17□□□□□ -0.94
LIG1-209ENST00000596104 STT3AP46977 705 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 KCNC1P48547 511 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 WNT3P56703 355 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 DOC2AQ14183 400 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 PPP1R7Q15435 360 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 TGFBIQ15582 683 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 DEFB113Q30KQ7 82 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 FBXO48Q5FWF7 155 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 HP1BP3Q5SSJ5 553 aaPredicted RBP9.17□□□□□ -0.94
LIG1-209ENST00000596104 PRAMEF20Q5VT98 475 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 DGAT2L6Q6ZPD8 337 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 FRA10AC1Q70Z53 315 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 ACOT4Q8N9L9 421 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 WFDC11Q8NEX6 87 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 TNIP2Q8NFZ5 429 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 SLC22A8Q8TCC7 542 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 ACTRT1Q8TDG2 376 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 CAPZA3Q96KX2 299 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 RUNDC3BQ96NL0 473 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 KCNC2Q96PR1 638 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 MCMBPQ9BTE3 642 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 MS4A8Q9BY19 250 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 DNAJC11Q9NVH1 559 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 COPS7AQ9UBW8 275 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 ASIC3Q9UHC3 531 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 CNOT11Q9UKZ1 510 aaKnown RBP9.17□□□□□ -0.94
LIG1-209ENST00000596104 BOKQ9UMX3 212 aaPredicted RBP9.17□□□□□ -0.94
LIG1-209ENST00000596104 JRKLQ9Y4A0 524 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 CHCHD2Q9Y6H1 151 aaPredicted RBP9.17□□□□□ -0.94
LIG1-209ENST00000596104 TEX264Q9Y6I9 313 aa9.17□□□□□ -0.94
LIG1-209ENST00000596104 HRNRQ86YZ3 2850 aaPredicted RBP9.16□□□□□ -0.94
LIG1-209ENST00000596104 NCF1BA6NI72 391 aaPredicted RBP9.16□□□□□ -0.94
LIG1-209ENST00000596104 NCF1CA8MVU1 366 aaPredicted RBP9.16□□□□□ -0.94
LIG1-209ENST00000596104 AHRRA9YTQ3 701 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 HRKO00198 91 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 DVL2O14641 736 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 EPPINO95925 133 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 RAF1P04049 648 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 FBXO45P0C2W1 286 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 NCF1P14598 390 aaPredicted RBP9.16□□□□□ -0.94
LIG1-209ENST00000596104 HIST1H1TP22492 207 aaPredicted RBP9.16□□□□□ -0.94
LIG1-209ENST00000596104 TACR1P25103 407 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 HOXC12P31275 282 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 TIMP3P35625 211 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 HSPA7P48741 367 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 TRPC1P48995 793 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 ZNF136P52737 540 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 KCNJ2P63252 427 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 LTBQ06643 244 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 TGM3Q08188 693 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 CRYZQ08257 329 aaKnown RBP9.16□□□□□ -0.94
LIG1-209ENST00000596104 MGAT5Q09328 741 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 TBL3Q12788 808 aaKnown RBP9.16□□□□□ -0.94
LIG1-209ENST00000596104 E2F2Q14209 437 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 BIVMQ86UB2 503 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 KRTAP1-3Q8IUG1 177 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 OR4N5Q8IXE1 308 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 PDIK1LQ8N165 341 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 TCAIMQ8N3R3 496 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 SLC15A4Q8N697 577 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 OR10G3Q8NGC4 313 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 ZNF473Q8WTR7 871 aaKnown RBP9.16□□□□□ -0.94
LIG1-209ENST00000596104 ESAMQ96AP7 390 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 LRRC39Q96DD0 335 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 PTCD3Q96EY7 689 aaKnown RBP9.16□□□□□ -0.94
LIG1-209ENST00000596104 FBXL20Q96IG2 436 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 SMR3AQ99954 134 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 TBCDQ9BTW9 1192 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 EFCAB11Q9BUY7 163 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 ROGDIQ9GZN7 287 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 DERL2Q9GZP9 239 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 PLEKHF2Q9H8W4 249 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 POPDC3Q9HBV1 291 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 WWOXQ9NZC7 414 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 CNIH4Q9P003 139 aa9.16□□□□□ -0.94
LIG1-209ENST00000596104 ZNF629Q9UEG4 869 aaPredicted RBP9.16□□□□□ -0.94
LIG1-209ENST00000596104 MTRF1LQ9UGC7 380 aaKnown RBP9.16□□□□□ -0.94
LIG1-209ENST00000596104 FOXD3Q9UJU5 478 aaPredicted RBP9.16□□□□□ -0.94
LIG1-209ENST00000596104 GOLGA6L10A0A0M3HER8 536 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 CLGNO14967 610 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 TRIM3O75382 744 aaPredicted RBP9.15□□□□□ -0.94
LIG1-209ENST00000596104 STK16O75716 305 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 C1QAP02745 245 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 EPXP11678 715 aa9.15□□□□□ -0.94
LIG1-209ENST00000596104 COX7A2P14406 83 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms