RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 HES7Q9BYE0 225 aa14.07□□□□□ -0.16
TRIM28-205ENST00000595028 ELOVL6Q9H5J4 265 aa14.07□□□□□ -0.16
TRIM28-205ENST00000595028 RPF2Q9H7B2 306 aaKnown RBP14.07□□□□□ -0.16
TRIM28-205ENST00000595028 TRIM45Q9H8W5 580 aaPredicted RBP14.07□□□□□ -0.16
TRIM28-205ENST00000595028 LRFN1Q9P244 771 aa14.07□□□□□ -0.16
TRIM28-205ENST00000595028 TRPS1Q9UHF7 1281 aa14.07□□□□□ -0.16
TRIM28-205ENST00000595028 C17orf105B2RV13 164 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 PRKNO60260 465 aaPredicted RBP14.06□□□□□ -0.16
TRIM28-205ENST00000595028 GLRA3O75311 464 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 PRKRAO75569 313 aaKnown RBP14.06□□□□□ -0.16
TRIM28-205ENST00000595028 SLC25A12O75746 678 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 SUPT7LO94864 414 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 CRYABP02511 175 aaKnown RBP14.06□□□□□ -0.16
TRIM28-205ENST00000595028 NR2F6P10588 404 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 TLX1P31314 330 aaPredicted RBP14.06□□□□□ -0.16
TRIM28-205ENST00000595028 CYB561P49447 251 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 PLIN5Q00G26 463 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 CLCQ05315 142 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 RASA2Q15283 850 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 UNC50Q53HI1 259 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 ZNF678Q5SXM1 525 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 C18orf63Q68DL7 685 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 CYP20A1Q6UW02 462 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 SLC22A9Q8IVM8 553 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 HORMAD2Q8N7B1 307 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 C7orf57Q8NEG2 295 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 MYRIPQ8NFW9 859 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 DNAJB8Q8NHS0 232 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 TRPC4APQ8TEL6 797 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 THAP3Q8WTV1 239 aaPredicted RBP14.06□□□□□ -0.16
TRIM28-205ENST00000595028 MTFMTQ96DP5 389 aaKnown RBP14.06□□□□□ -0.16
TRIM28-205ENST00000595028 ZNF382Q96SR6 550 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 OR8D2Q9GZM6 311 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 KLHL1Q9NR64 748 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 ZNF225Q9UK10 706 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 EMCNQ9ULC0 261 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 ASB4Q9Y574 426 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 AKAP9Q99996 3911 aa14.06□□□□□ -0.16
TRIM28-205ENST00000595028 A0A1W2PPM1 405 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 ASPDHA6ND91 283 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 SMIM23A6NLE4 172 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 FOXO6A8MYZ6 492 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 PROM1O43490 865 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 NME2P1O60361 137 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 ZFAND5O76080 213 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 OR4F21O95013 312 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 AIFM1O95831 613 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 FAM58BPP0C7Q3 252 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 COX7A2P14406 83 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 NME2P22392 152 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 HSD17B3P37058 310 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 STT3AP46977 705 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 HLCSP50747 726 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 PRKAA2P54646 552 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 VSNL1P62760 191 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 FOLH1Q04609 750 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 SGO1Q5FBB7 561 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 C1QL3Q5VWW1 255 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 FAM219BQ5XKK7 198 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 SH2D5Q6ZV89 423 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 ZNF227Q86WZ6 799 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 OR4N5Q8IXE1 308 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 SLC2A12Q8TD20 617 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 EPS8L3Q8TE67 593 aaKnown RBP14.05□□□□□ -0.16
TRIM28-205ENST00000595028 SELENOMQ8WWX9 145 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 TANKQ92844 425 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 L3HYPDHQ96EM0 354 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 DGAT2Q96PD7 388 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 MRPL1Q9BYD6 325 aaKnown RBP14.05□□□□□ -0.16
TRIM28-205ENST00000595028 DCDC2Q9UHG0 476 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 ERRFI1Q9UJM3 462 aaPredicted RBP14.05□□□□□ -0.16
TRIM28-205ENST00000595028 SNX6Q9UNH7 406 aa14.05□□□□□ -0.16
TRIM28-205ENST00000595028 CSMD2Q7Z408 3487 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 A0A1W2PR48 441 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 TMEM200CA6NKL6 621 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 ZNF500O60304 480 aaPredicted RBP14.04□□□□□ -0.16
TRIM28-205ENST00000595028 CDH16O75309 829 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 ITGA10O75578 1167 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 PDYNP01213 254 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 GBAP04062 536 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 SP1P08047 785 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 KRT15P19012 456 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 TNNI3P19429 210 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 IMPDH1P20839 514 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 MST1P26927 711 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 LCP2Q13094 533 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 BIKQ13323 160 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 TCHHL1Q5QJ38 904 aaPredicted RBP14.04□□□□□ -0.16
TRIM28-205ENST00000595028 OR52E8Q6IFG1 317 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 SLC25A25Q6KCM7 469 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 HSDL2Q6YN16 418 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 GPRIN3Q6ZVF9 776 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 PAGE2Q7Z2X7 111 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 GALNTL5Q7Z4T8 443 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 ZNF321PQ8N8H1 164 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 CDYL2Q8N8U2 506 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 FRMD6Q96NE9 622 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 WDR41Q9HAD4 459 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 BRF2Q9HAW0 419 aa14.04□□□□□ -0.16
TRIM28-205ENST00000595028 FARSBQ9NSD9 589 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms