RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 PKDREJQ9NTG1 2253 aa16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 A0A1B0GTH9 108 aa16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 A0A1W2PPM1 405 aa16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 LRRC14BA6NHZ5 514 aa16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 A8MT66 165 aa16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 TFECO14948 347 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 ERI3O43414 337 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 ATP5F1P24539 256 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 PIK3CBP42338 1070 aa16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 CLCN2P51788 898 aa16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 BTN3A2P78410 334 aa16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 RCN2Q14257 317 aa16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 ADPRMQ3LIE5 342 aa16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 CA13Q8N1Q1 262 aa16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 TMEM151AQ8N4L1 468 aa16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 MREGQ8N565 214 aa16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 L3MBTL4Q8NA19 623 aa16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 ZFP62Q8NB50 900 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 ZNF473Q8WTR7 871 aaKnown RBP16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 CCDC126Q96EE4 140 aa16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 NTMT1Q9BV86 223 aa16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 COPS7BQ9H9Q2 264 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 PLSCR2Q9NRY7 297 aa16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 PCTPQ9UKL6 214 aa16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 SCN3AQ9NY46 2000 aa16.33■□□□□ 0.2
SHKBP1-203ENST00000594298 C4orf51C9J302 202 aa16.32■□□□□ 0.2
SHKBP1-203ENST00000594298 H0YIV9 168 aa16.32■□□□□ 0.2
SHKBP1-203ENST00000594298 COPEO14579 308 aa16.32■□□□□ 0.2
SHKBP1-203ENST00000594298 B3GALT2O43825 422 aa16.32■□□□□ 0.2
SHKBP1-203ENST00000594298 PEX1O43933 1283 aa16.32■□□□□ 0.2
SHKBP1-203ENST00000594298 SBK3P0C264 359 aa16.32■□□□□ 0.2
SHKBP1-203ENST00000594298 HNRNPH1P31943 449 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-203ENST00000594298 CRHR1P34998 444 aa16.32■□□□□ 0.2
SHKBP1-203ENST00000594298 PLA2G16P53816 162 aa16.32■□□□□ 0.2
SHKBP1-203ENST00000594298 TLE4Q04727 773 aa16.32■□□□□ 0.2
SHKBP1-203ENST00000594298 CCDC153Q494R4 210 aa16.32■□□□□ 0.2
SHKBP1-203ENST00000594298 CMPK2Q5EBM0 449 aa16.32■□□□□ 0.2
SHKBP1-203ENST00000594298 C10orf62Q5T681 223 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-203ENST00000594298 SPNS3Q6ZMD2 512 aa16.32■□□□□ 0.2
SHKBP1-203ENST00000594298 VN1R5Q7Z5H4 357 aa16.32■□□□□ 0.2
SHKBP1-203ENST00000594298 SCUBE1Q8IWY4 988 aa16.32■□□□□ 0.2
SHKBP1-203ENST00000594298 ADGRG4Q8IZF6 3080 aa16.32■□□□□ 0.2
SHKBP1-203ENST00000594298 KCNC2Q96PR1 638 aa16.32■□□□□ 0.2
SHKBP1-203ENST00000594298 SERINC2Q96SA4 455 aa16.32■□□□□ 0.2
SHKBP1-203ENST00000594298 TBCDQ9BTW9 1192 aa16.32■□□□□ 0.2
SHKBP1-203ENST00000594298 C1QTNF3Q9BXJ4 246 aa16.32■□□□□ 0.2
SHKBP1-203ENST00000594298 AICDAQ9GZX7 198 aa16.32■□□□□ 0.2
SHKBP1-203ENST00000594298 AKAP9Q99996 3911 aa16.32■□□□□ 0.2
SHKBP1-203ENST00000594298 ANKRD17O75179 2603 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-203ENST00000594298 DCHS2Q6V1P9 2916 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 TRBV11-1A0A0K0K1C0 115 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 A8MUA0 341 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 HS6ST1O60243 411 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 ITGA10O75578 1167 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 MYO1DO94832 1006 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 OTCP00480 354 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 TPOP07202 933 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 RPS17P08708 135 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 IGFBP2P18065 325 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 KRT4P19013 534 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 IMPDH1P20839 514 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 PTX3P26022 381 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 GPR143P51810 404 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 MTTPP55157 894 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 NAA20P61599 178 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 HERVK_113P63132 956 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 CPSF6Q16630 551 aaKnown RBP eCLIP16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 AP5B1Q2VPB7 878 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 TMEM211Q6ICI0 200 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 ABHD17CQ6PCB6 329 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 MEX3BQ6ZN04 569 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 SH2D5Q6ZV89 423 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 MILR1Q7Z6M3 343 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 CDH24Q86UP0 819 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 CD163Q86VB7 1156 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 CYP4Z2PQ8N1L4 340 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 MARVELD2Q8N4S9 558 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 TMEM156Q8N614 296 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 OR2W6PQ8NHA6 318 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 HUS1BQ8NHY5 278 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 ZNF483Q8TF39 744 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 VMP1Q96GC9 406 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 F2RL3Q96RI0 385 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 ERVK-6Q9BXR3 956 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 MS4A8Q9BY19 250 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 SEMA4BQ9NPR2 832 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 PSD3Q9NYI0 1048 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 MID2Q9UJV3 735 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 ZNF223Q9UK11 482 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 STK38LQ9Y2H1 464 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 RNF11Q9Y3C5 154 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 HRH3Q9Y5N1 445 aa16.31■□□□□ 0.2
SHKBP1-203ENST00000594298 OR7A17O14581 309 aa16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 DLX3O60479 287 aa16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 SUPT7LO94864 414 aa16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 TGFB1P01137 390 aa16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 MYL2P10916 166 aa16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 ARFIP1P53367 373 aa16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 PRKAA2P54646 552 aa16.3■□□□□ 0.2
SHKBP1-203ENST00000594298 HSD17B7P56937 341 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms