RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 DOCK7Q96N67 2140 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 C17orf105B2RV13 164 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 KIF2AO00139 706 aaPredicted RBP13.64□□□□□ -0.23
PNKP-202ENST00000593706 KLK8O60259 260 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 CTNSO60931 367 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 KERAO60938 352 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 GLSO94925 669 aaPredicted RBP13.64□□□□□ -0.23
PNKP-202ENST00000593706 ALDOAP04075 364 aaKnown RBP13.64□□□□□ -0.23
PNKP-202ENST00000593706 P04436 131 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 CTAGE8P0CG41 777 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 CD22P20273 847 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 CRABP2P29373 138 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 DNAJA1P31689 397 aaKnown RBP13.64□□□□□ -0.23
PNKP-202ENST00000593706 ZFP36L2P47974 494 aaKnown RBP13.64□□□□□ -0.23
PNKP-202ENST00000593706 DNASE1L1P49184 302 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 MAN2A2P49641 1150 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 RNF4P78317 190 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 GLE1Q53GS7 698 aaKnown RBP13.64□□□□□ -0.23
PNKP-202ENST00000593706 FBXO48Q5FWF7 155 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 SULT1C3Q6IMI6 304 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 OPN5Q6U736 354 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 VN1R5Q7Z5H4 357 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 CTAGE4Q8IX94 777 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 TMEM251Q8N6I4 163 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 SNX31Q8N9S9 440 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 GOLM1Q8NBJ4 401 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 MYRIPQ8NFW9 859 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 SLC2A12Q8TD20 617 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 UBTD2Q8WUN7 234 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 ISL2Q96A47 359 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 SCYL1Q96KG9 808 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 TTYH2Q9BSA4 534 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 ALOXE3Q9BYJ1 711 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 PITHD1Q9GZP4 211 aaPredicted RBP13.64□□□□□ -0.23
PNKP-202ENST00000593706 CDC42EP4Q9H3Q1 356 aaKnown RBP13.64□□□□□ -0.23
PNKP-202ENST00000593706 ALG9Q9H6U8 611 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 LDAHQ9H6V9 325 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 NT5DC2Q9H857 520 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 CNOT10Q9H9A5 744 aaKnown RBP13.64□□□□□ -0.23
PNKP-202ENST00000593706 IL1RL2Q9HB29 575 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 SACM1LQ9NTJ5 587 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 DNAJC11Q9NVH1 559 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 ACAD8Q9UKU7 415 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 SPACA6W5XKT8 324 aa13.64□□□□□ -0.23
PNKP-202ENST00000593706 ATP6AP2A0A1C7CYW4 349 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 CYR61O00622 381 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 LDB3O75112 727 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 ATP6AP2O75787 350 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 IGHG3P01860 377 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 MTHFD2P13995 350 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 COX7A2P14406 83 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 CNR1P21554 472 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 MAGEA12P43365 314 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 HSPA7P48741 367 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 IRF9Q00978 393 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 PCDH1Q08174 1060 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 SERTAD2Q14140 314 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 ADPRMQ3LIE5 342 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 WLSQ5T9L3 541 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 ADNP2Q6IQ32 1131 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 ABHD17CQ6PCB6 329 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 TRILQ7L0X0 811 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 WDR53Q7Z5U6 358 aaPredicted RBP13.63□□□□□ -0.23
PNKP-202ENST00000593706 CCDC91Q7Z6B0 441 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 ZNF321PQ8N8H1 164 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 OR5L2Q8NGL0 311 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 PTPMT1Q8WUK0 201 aaPredicted RBP13.63□□□□□ -0.23
PNKP-202ENST00000593706 ESAMQ96AP7 390 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 SARAFQ96BY9 339 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 SGCZQ96LD1 299 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 GPR78Q96P69 363 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 KCNC2Q96PR1 638 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 FMO2Q99518 471 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 SNX15Q9NRS6 342 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 VTI1BQ9UEU0 232 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 FAM215AQ9Y5M1 114 aa13.63□□□□□ -0.23
PNKP-202ENST00000593706 A0A0G2JNJ9 132 aa13.62□□□□□ -0.23
PNKP-202ENST00000593706 AQP7O14520 342 aa13.62□□□□□ -0.23
PNKP-202ENST00000593706 WDR1O75083 606 aa13.62□□□□□ -0.23
PNKP-202ENST00000593706 STK16O75716 305 aa13.62□□□□□ -0.23
PNKP-202ENST00000593706 C2P06681 752 aa13.62□□□□□ -0.23
PNKP-202ENST00000593706 CELA3AP09093 270 aa13.62□□□□□ -0.23
PNKP-202ENST00000593706 LTA4HP09960 611 aaKnown RBP13.62□□□□□ -0.23
PNKP-202ENST00000593706 GLI4P10075 376 aa13.62□□□□□ -0.23
PNKP-202ENST00000593706 CCL3P10147 92 aa13.62□□□□□ -0.23
PNKP-202ENST00000593706 ID2Q02363 134 aa13.62□□□□□ -0.23
PNKP-202ENST00000593706 FOLH1Q04609 750 aa13.62□□□□□ -0.23
PNKP-202ENST00000593706 PDK4Q16654 411 aa13.62□□□□□ -0.23
PNKP-202ENST00000593706 C1orf185Q5T7R7 199 aa13.62□□□□□ -0.23
PNKP-202ENST00000593706 MROH9Q5TGP6 573 aa13.62□□□□□ -0.23
PNKP-202ENST00000593706 OR8K3Q8NH51 312 aa13.62□□□□□ -0.23
PNKP-202ENST00000593706 STAG3L4Q8TBR4 150 aa13.62□□□□□ -0.23
PNKP-202ENST00000593706 KCTD4Q8WVF5 259 aa13.62□□□□□ -0.23
PNKP-202ENST00000593706 SLC44A1Q8WWI5 657 aa13.62□□□□□ -0.23
PNKP-202ENST00000593706 NXNL1Q96CM4 212 aa13.62□□□□□ -0.23
PNKP-202ENST00000593706 PTCD3Q96EY7 689 aaKnown RBP13.62□□□□□ -0.23
PNKP-202ENST00000593706 F2RL3Q96RI0 385 aa13.62□□□□□ -0.23
PNKP-202ENST00000593706 EFCAB11Q9BUY7 163 aa13.62□□□□□ -0.23
PNKP-202ENST00000593706 ROGDIQ9GZN7 287 aa13.62□□□□□ -0.23
PNKP-202ENST00000593706 TSPYL1Q9H0U9 437 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms