RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 ZNF721Q8TF20 911 aa12.3□□□□□ -0.44
APOC1-209ENST00000592885 KCTD4Q8WVF5 259 aa12.3□□□□□ -0.44
APOC1-209ENST00000592885 TANKQ92844 425 aa12.3□□□□□ -0.44
APOC1-209ENST00000592885 NXNL1Q96CM4 212 aa12.3□□□□□ -0.44
APOC1-209ENST00000592885 TTTY12Q9BZ98 90 aa12.3□□□□□ -0.44
APOC1-209ENST00000592885 RPF2Q9H7B2 306 aaKnown RBP12.3□□□□□ -0.44
APOC1-209ENST00000592885 ACTR8Q9H981 624 aa12.3□□□□□ -0.44
APOC1-209ENST00000592885 IL1RL2Q9HB29 575 aa12.3□□□□□ -0.44
APOC1-209ENST00000592885 SACM1LQ9NTJ5 587 aa12.3□□□□□ -0.44
APOC1-209ENST00000592885 LYARQ9NX58 379 aaKnown RBP12.3□□□□□ -0.44
APOC1-209ENST00000592885 PSD3Q9NYI0 1048 aa12.3□□□□□ -0.44
APOC1-209ENST00000592885 TNPO3Q9Y5L0 923 aaKnown RBP12.3□□□□□ -0.44
APOC1-209ENST00000592885 PHF3Q92576 2039 aaKnown RBP12.29□□□□□ -0.44
APOC1-209ENST00000592885 C19orf84I3L1E1 186 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 PLPP1O14494 284 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 BCKDKO14874 412 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 FGF17O60258 216 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 KLHL2O95198 593 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 ETHE1O95571 254 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 IGHG3P01860 377 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 IGKV3-11P04433 115 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 P04436 131 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 C2P06681 752 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 SNRPB2P08579 225 aaKnown RBP12.29□□□□□ -0.44
APOC1-209ENST00000592885 GFAPP14136 432 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 PTX3P26022 381 aaPredicted RBP12.29□□□□□ -0.44
APOC1-209ENST00000592885 CHRNB4P30926 498 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 GALNSP34059 522 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 SERPINB8P50452 374 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 PPIAP62937 165 aaKnown RBP12.29□□□□□ -0.44
APOC1-209ENST00000592885 SLAMF1Q13291 335 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 CUL3Q13618 768 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 DDX39BQ13838 428 aaKnown RBP12.29□□□□□ -0.44
APOC1-209ENST00000592885 PCBP2Q15366 365 aaKnown RBP eCLIP12.29□□□□□ -0.443e-48■■■□□ 16.7
APOC1-209ENST00000592885 SPRED3Q2MJR0 410 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 C10orf62Q5T681 223 aaPredicted RBP12.29□□□□□ -0.44
APOC1-209ENST00000592885 C3P1Q6ZMU1 363 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 C16orf47Q6ZP98 133 aaPredicted RBP12.29□□□□□ -0.44
APOC1-209ENST00000592885 NCCRP1Q6ZVX7 275 aaPredicted RBP12.29□□□□□ -0.44
APOC1-209ENST00000592885 ACAD11Q709F0 780 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 GPR180Q86V85 440 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 ST13P4Q8IZP2 240 aaPredicted RBP12.29□□□□□ -0.44
APOC1-209ENST00000592885 ZNF321PQ8N8H1 164 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 RBM18Q96H35 190 aaKnown RBP12.29□□□□□ -0.44
APOC1-209ENST00000592885 FBXL20Q96IG2 436 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 SCYL1Q96KG9 808 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 OR51B5Q9H339 312 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 LIN28AQ9H9Z2 209 aaKnown RBP12.29□□□□□ -0.44
APOC1-209ENST00000592885 SNX15Q9NRS6 342 aa12.29□□□□□ -0.44
APOC1-209ENST00000592885 A0A1B0GVC2 190 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 PINLYPA6NC86 204 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 OR6C76A6NM76 312 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 FIGNL2A6NMB9 653 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 FAM166BA8MTA8 275 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 ZNHIT1O43257 154 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 ALOX15P16050 662 aaPredicted RBP12.28□□□□□ -0.44
APOC1-209ENST00000592885 CAPN3P20807 821 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 GMPRP36959 345 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 KIR3DL1P43629 444 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 IRF9Q00978 393 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 FOLH1Q04609 750 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 GTF2H2Q13888 395 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 PFKFB4Q16877 469 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 PIGGQ5H8A4 983 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 MROH9Q5TGP6 573 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 C8orf74Q6P047 294 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 GTF2H2CQ6P1K8 395 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 SYT10Q6XYQ8 523 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 FAM47EQ6ZV65 393 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 NUDT13Q86X67 352 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 MYLK4Q86YV6 388 aaPredicted RBP12.28□□□□□ -0.44
APOC1-209ENST00000592885 RELL1Q8IUW5 271 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 ZNF295-AS1Q8N0V1 137 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 MARVELD2Q8N4S9 558 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 L3MBTL4Q8NA19 623 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 CHTF18Q8WVB6 975 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 RND1Q92730 232 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 DDX31Q9H8H2 851 aaKnown RBP12.28□□□□□ -0.44
APOC1-209ENST00000592885 ZDHHC18Q9NUE0 388 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 TMCO1Q9UM00 188 aa12.28□□□□□ -0.44
APOC1-209ENST00000592885 FBN2P35556 2912 aa12.27□□□□□ -0.44
APOC1-209ENST00000592885 A0A096LPK6 155 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 A0A0A6YYD5 115 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 A0A0G2JMM0 328 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 MYOCOSA0A1B0GUC4 107 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 A0A1W2PPB8 328 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 A0A1W2PRS3 328 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 HMX2A2RU54 273 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 KIR3DP1A8MWS1 328 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 FOXO6A8MYZ6 492 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 FOXE1O00358 373 aaPredicted RBP12.27□□□□□ -0.45
APOC1-209ENST00000592885 SAP18O00422 153 aaKnown RBP12.27□□□□□ -0.45
APOC1-209ENST00000592885 AQP7O14520 342 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 SUSD5O60279 629 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 SEMA3DO95025 777 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 NR2F6P10588 404 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 HNRNPH2P55795 449 aaKnown RBP12.27□□□□□ -0.45
APOC1-209ENST00000592885 RPS13P62277 151 aaKnown RBP12.27□□□□□ -0.45
APOC1-209ENST00000592885 ID2Q02363 134 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 FOXO1Q12778 655 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms