RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 BIKQ13323 160 aa16.61■□□□□ 0.25
PRKCSH-211ENST00000590098 NAB1Q13506 487 aa16.61■□□□□ 0.25
PRKCSH-211ENST00000590098 DDX39BQ13838 428 aaKnown RBP16.61■□□□□ 0.25
PRKCSH-211ENST00000590098 GXYLT1Q4G148 440 aa16.61■□□□□ 0.25
PRKCSH-211ENST00000590098 DEPDC1Q5TB30 811 aa16.61■□□□□ 0.25
PRKCSH-211ENST00000590098 GRHL2Q6ISB3 625 aa16.61■□□□□ 0.25
PRKCSH-211ENST00000590098 FAM47EQ6ZV65 393 aa16.61■□□□□ 0.25
PRKCSH-211ENST00000590098 ACAD11Q709F0 780 aa16.61■□□□□ 0.25
PRKCSH-211ENST00000590098 MYLK4Q86YV6 388 aaPredicted RBP16.61■□□□□ 0.25
PRKCSH-211ENST00000590098 OR5M3Q8NGP4 307 aa16.61■□□□□ 0.25
PRKCSH-211ENST00000590098 FBF1Q8TES7 1133 aa16.61■□□□□ 0.25
PRKCSH-211ENST00000590098 ZNF721Q8TF20 911 aa16.61■□□□□ 0.25
PRKCSH-211ENST00000590098 UBTD2Q8WUN7 234 aa16.61■□□□□ 0.25
PRKCSH-211ENST00000590098 TANKQ92844 425 aa16.61■□□□□ 0.25
PRKCSH-211ENST00000590098 RBM18Q96H35 190 aaKnown RBP16.61■□□□□ 0.25
PRKCSH-211ENST00000590098 ATOH8Q96SQ7 321 aa16.61■□□□□ 0.25
PRKCSH-211ENST00000590098 OR51B5Q9H339 312 aa16.61■□□□□ 0.25
PRKCSH-211ENST00000590098 IL1RL2Q9HB29 575 aa16.61■□□□□ 0.25
PRKCSH-211ENST00000590098 KCNJ16Q9NPI9 418 aa16.61■□□□□ 0.25
PRKCSH-211ENST00000590098 RNF6Q9Y252 685 aa16.61■□□□□ 0.25
PRKCSH-211ENST00000590098 ACOT9Q9Y305 439 aa16.61■□□□□ 0.25
PRKCSH-211ENST00000590098 HIVEP1P15822 2718 aa16.6■□□□□ 0.25
PRKCSH-211ENST00000590098 OR14I1A6ND48 311 aa16.6■□□□□ 0.25
PRKCSH-211ENST00000590098 FGF17O60258 216 aa16.6■□□□□ 0.25
PRKCSH-211ENST00000590098 GLSO94925 669 aaPredicted RBP16.6■□□□□ 0.25
PRKCSH-211ENST00000590098 TLX1P31314 330 aaPredicted RBP16.6■□□□□ 0.25
PRKCSH-211ENST00000590098 STT3AP46977 705 aa16.6■□□□□ 0.25
PRKCSH-211ENST00000590098 PCDH1Q08174 1060 aa16.6■□□□□ 0.25
PRKCSH-211ENST00000590098 MPEG1Q2M385 716 aa16.6■□□□□ 0.25
PRKCSH-211ENST00000590098 PIGGQ5H8A4 983 aa16.6■□□□□ 0.25
PRKCSH-211ENST00000590098 EMC4Q5J8M3 183 aa16.6■□□□□ 0.25
PRKCSH-211ENST00000590098 GPR180Q86V85 440 aa16.6■□□□□ 0.25
PRKCSH-211ENST00000590098 OR4N5Q8IXE1 308 aa16.6■□□□□ 0.25
PRKCSH-211ENST00000590098 FAM109AQ8N4B1 249 aa16.6■□□□□ 0.25
PRKCSH-211ENST00000590098 TEX9Q8N6V9 391 aa16.6■□□□□ 0.25
PRKCSH-211ENST00000590098 ACBD4Q8NC06 268 aa16.6■□□□□ 0.25
PRKCSH-211ENST00000590098 FBXO25Q8TCJ0 367 aa16.6■□□□□ 0.25
PRKCSH-211ENST00000590098 SENP5Q96HI0 755 aaPredicted RBP16.6■□□□□ 0.25
PRKCSH-211ENST00000590098 ART5Q96L15 291 aa16.6■□□□□ 0.25
PRKCSH-211ENST00000590098 RPF2Q9H7B2 306 aaKnown RBP16.6■□□□□ 0.25
PRKCSH-211ENST00000590098 MCCC2Q9HCC0 563 aa16.6■□□□□ 0.25
PRKCSH-211ENST00000590098 IGSF5Q9NSI5 407 aa16.6■□□□□ 0.25
PRKCSH-211ENST00000590098 PHF11Q9UIL8 331 aa16.6■□□□□ 0.25
PRKCSH-211ENST00000590098 FAM90A27PA6NNH2 459 aa16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 FOXO6A8MYZ6 492 aa16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 BCKDKO14874 412 aa16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 PIK3CBP42338 1070 aa16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 MAGEA5P43359 124 aa16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 PHEXP78562 749 aa16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 IGLV3-21P80748 117 aaPredicted RBP16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 PLIN5Q00G26 463 aa16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 ASPHQ12797 758 aa16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 FAM83EQ2M2I3 478 aa16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 ZNF585AQ6P3V2 769 aa16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 CCDC91Q7Z6B0 441 aa16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 CCDC71Q8IV32 467 aaPredicted RBP16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 TMEM251Q8N6I4 163 aa16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 OR5M9Q8NGP3 310 aa16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 HUS1BQ8NHY5 278 aa16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 NUBPLQ8TB37 319 aa16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 SLC22A8Q8TCC7 542 aa16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 PPWD1Q96BP3 646 aaKnown RBP16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 NXNL1Q96CM4 212 aa16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 SMC6Q96SB8 1091 aa16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 TREX2Q9BQ50 279 aaPredicted RBP16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 SORBS1Q9BX66 1292 aaKnown RBP16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 PNPLA3Q9NST1 481 aa16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 PCDHGA11Q9Y5H2 935 aa16.59■□□□□ 0.25
PRKCSH-211ENST00000590098 A0A087X1B8 175 aa16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 NKX2-6A6NCS4 301 aa16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 FIGNL2A6NMB9 653 aa16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 ZNF354AO60765 605 aaPredicted RBP16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 CCL3P10147 92 aa16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 GFAPP14136 432 aa16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 PTX3P26022 381 aaPredicted RBP16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 ACVR2AP27037 513 aa16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 CASQ1P31415 396 aa16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 BUD31P41223 144 aaPredicted RBP16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 DNASE1L1P49184 302 aa16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 NUP107P57740 925 aa16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 TNFRSF17Q02223 184 aa16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 FOLH1Q04609 750 aa16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 SLC10A1Q14973 349 aa16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 LIPJQ5W064 366 aa16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 TRILQ7L0X0 811 aa16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 RNF175Q8N4F7 328 aa16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 RPRMLQ8N4K4 120 aa16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 OR10Q1Q8NGQ4 319 aa16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 RHEBL1Q8TAI7 183 aa16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 KCTD4Q8WVF5 259 aa16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 REPS1Q96D71 796 aa16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 MTERF1Q99551 399 aaKnown RBP16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 UCK2Q9BZX2 261 aa16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 LDAHQ9H6V9 325 aa16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 ACTR8Q9H981 624 aa16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 DMRT3Q9NQL9 472 aa16.58■□□□□ 0.24
PRKCSH-211ENST00000590098 IQANK1A0A1B0GTG1 560 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 ATP6AP2A0A1C7CYW4 349 aa16.57■□□□□ 0.24
PRKCSH-211ENST00000590098 CCDC189A1A4V9 331 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms